RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 CTDNEP1O95476 244 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 RXRAP19793 462 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 SYT1P21579 422 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 METAP2P50579 478 aaKnown RBP eCLIP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 GABPAQ06546 454 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 PKP1Q13835 747 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 NFKBIBQ15653 356 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 GPR162Q16538 588 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 C11orf91Q3C1V1 193 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 APOA5Q6Q788 366 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 CATIPQ7Z7H3 387 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 DGKHQ86XP1 1220 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 CCDC144CPQ8IYA2 1237 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 ENAHQ8N8S7 591 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 NUP133Q8WUM0 1156 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 DPF2Q92785 391 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 TNPO1Q92973 898 aaKnown RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 MYL10Q9BUA6 226 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 GSX2Q9BZM3 304 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 MYOZ2Q9NPC6 264 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 TCP11L1Q9NUJ3 509 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 PI4KBQ9UBF8 816 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 SWAP70Q9UH65 585 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 SERPINB13Q9UIV8 391 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 ZDHHC9Q9Y397 364 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-208ENST00000556237 LAMA4Q16363 1823 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 MAST2Q6P0Q8 1798 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 COL4A5P29400 1685 aa7.38□□□□□ -1.23
HIF1A-208ENST00000556237 WDR33Q9C0J8 1336 aaKnown RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 CCDC196A0A1B0GTZ2 297 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 WNT10BO00744 389 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 STX6O43752 255 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 BRD1O95696 1058 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 PDIA4P13667 645 aaKnown RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 YBX3P16989 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 PDCP20941 246 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 GRNP28799 593 aaKnown RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 CDC27P30260 824 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 ZNF280AP59817 542 aaPredicted RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 HMGN5P82970 282 aaKnown RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 NBPF9Q3BBW0 867 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 TBC1D10BQ4KMP7 808 aaPredicted RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 C16orf46Q6P387 395 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 ZNF654Q8IZM8 581 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 FANCBQ8NB91 859 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 NSUN7Q8NE18 718 aaKnown RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 FAM151AQ8WW52 585 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 ANKS1AQ92625 1134 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 KAT14Q9H8E8 782 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 IL17RBQ9NRM6 502 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 RNF181Q9P0P0 153 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 ORC3Q9UBD5 711 aaPredicted RBP7.37□□□□□ -1.23
HIF1A-208ENST00000556237 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
HIF1A-208ENST00000556237 FER1L6Q2WGJ9 1857 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 ROBO3Q96MS0 1386 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 ZNF541Q9H0D2 1346 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 PTPDC1A2A3K4 754 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 VPS37CA5D8V6 355 aaPredicted RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 H3BQV1 296 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 TGFBR3LH3BV60 316 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 MPHOSPH10O00566 681 aaKnown RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CDKL5O76039 1030 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CALM1P0DP23 149 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CALM2P0DP24 149 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CALM3P0DP25 149 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 ZSCAN22P10073 491 aaPredicted RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 AKR1B1P15121 316 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 NFKB1P19838 968 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 TNNI2P48788 182 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 SSRP1Q08945 709 aaKnown RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CCINQ13939 588 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 PPP2R5BQ15173 497 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 PCSK7Q16549 785 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CERKLQ49MI3 558 aaPredicted RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 FKBP1CQ5VVH2 108 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 IER5Q5VY09 327 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 C9orf131Q5VYM1 1079 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 IFT43Q96FT9 208 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 ZBED3Q96IU2 234 aaPredicted RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 CCDC17Q96LX7 622 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 GBP4Q96PP9 640 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 EHD4Q9H223 541 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
HIF1A-208ENST00000556237 BRCA1P38398 1863 aaKnown RBP7.36□□□□□ -1.23
HIF1A-208ENST00000556237 OPLAHO14841 1288 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 DDNO94850 711 aaPredicted RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 BAG4O95429 457 aaKnown RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 TOP1P11387 765 aaKnown RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 FDPSP14324 419 aaKnown RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 IFNAR1P17181 557 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms