RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 YTHDC1Q96MU7 727 aaKnown RBP5.35□□□□□ -1.55
NUMB-220ENST00000556112 BICC1Q9H694 974 aaKnown RBP5.35□□□□□ -1.55
NUMB-220ENST00000556112 LRRC4CQ9HCJ2 640 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 CNNM1Q9NRU3 951 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 RCAN3Q9UKA8 241 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 CACNA1FO60840 1977 aa5.35□□□□□ -1.55
NUMB-220ENST00000556112 ARFGEF1Q9Y6D6 1849 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 DLEC1Q9Y238 1755 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 TNRC6CQ9HCJ0 1690 aaKnown RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 ZNF804BA4D1E1 1349 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 IQCA1LA6NCM1 817 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 KIAA1324LA8MWY0 1029 aaPredicted RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 TAF5LO75529 589 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 FOSL1P15407 271 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 KCNJ4P48050 445 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CDK8P49336 464 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 LMNB2Q03252 620 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CHRNDQ07001 517 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CXCL9Q07325 125 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CAMK2GQ13555 558 aaPredicted RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 TNIP1Q15025 636 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CYP27C1Q4G0S4 372 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 ZNF394Q53GI3 561 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 WIPI1Q5MNZ9 446 aaPredicted RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 ZBTB37Q5TC79 503 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 CIAPIN1Q6FI81 312 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 FTSJ3Q8IY81 847 aaKnown RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 ANKRD44Q8N8A2 993 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 RHOVQ96L33 236 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 MEIS3Q99687 375 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 DDX41Q9UJV9 622 aaKnown RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 TNNQ9UQP3 1299 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 RIPOR2Q9Y4F9 1068 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 LRRFIP2Q9Y608 721 aaKnown RBP5.34□□□□□ -1.55
NUMB-220ENST00000556112 CHD4Q14839 1912 aa5.34□□□□□ -1.55
NUMB-220ENST00000556112 COL11A2P13942 1736 aaPredicted RBP5.34□□□□□ -1.56
NUMB-220ENST00000556112 MROH5Q6ZUA9 1318 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 WTIPA6NIX2 430 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 EYA2O00167 538 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 PLIN1O60240 522 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 ECE2O60344 883 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 RAD17O75943 681 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 PF4P02776 101 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 GNAI2P04899 355 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 NTF4P34130 210 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 EIF4A3P38919 411 aaKnown RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 RFX5P48382 616 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 C1QTNF8P60827 252 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 UBE4AQ14139 1066 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 CYFIP1Q7L576 1253 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 CCDC84Q86UT8 332 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 DTX1Q86Y01 620 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 ZNF654Q8IZM8 581 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 KCT2Q8NC54 265 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 ZNF507Q8TCN5 953 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 DPF2Q92785 391 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 GPR101Q96P66 508 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 PUS3Q9BZE2 481 aaKnown RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 TGIF2Q9GZN2 237 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 CHMP4BQ9H444 224 aaKnown RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 DBNDD1Q9H9R9 158 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 HACL1Q9UJ83 578 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.33□□□□□ -1.56
NUMB-220ENST00000556112 SNCAIPQ9Y6H5 919 aa5.33□□□□□ -1.56
NUMB-220ENST00000556112 DDX60Q8IY21 1712 aaKnown RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 ZNF541Q9H0D2 1346 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 YDJCA8MPS7 323 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 SRGAP3O43295 1099 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 LEFTY1O75610 366 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 PDE8BO95263 885 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 SPINK2P20155 84 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 EPHX2P34913 555 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 ETF1P62495 437 aaKnown RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 RACK1P63244 317 aaKnown RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 ATP8B2P98198 1209 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 FAM160A1Q05DH4 1040 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 MTX1Q13505 466 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 LRRC24Q50LG9 513 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 SNAP47Q5SQN1 464 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 C15orf52Q6ZUT6 534 aaKnown RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 UBE3DQ7Z6J8 389 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 PNMA8AQ86V59 439 aaPredicted RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 ITPRIPQ8IWB1 547 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 TOP6BLQ8N6T0 577 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 KLHDC4Q8TBB5 520 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 PANK1Q8TE04 598 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 PSMG3-AS1Q96PY0 264 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 DUSP23Q9BVJ7 150 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 WNT10AQ9GZT5 417 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 COA1Q9GZY4 146 aa5.32□□□□□ -1.56
NUMB-220ENST00000556112 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
NUMB-220ENST00000556112 CD209Q9NNX6 404 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms