RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 TRIM47Q96LD4 638 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 AK8Q96MA6 479 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
APEX1-212ENST00000556054 RIT2Q99578 217 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
APEX1-212ENST00000556054 PCDHA7Q9UN72 937 aa13.58□□□□□ -0.24
APEX1-212ENST00000556054 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 SLC26A4O43511 780 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 FKTNO75072 461 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
APEX1-212ENST00000556054 CTGFP29279 349 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
APEX1-212ENST00000556054 UBE2HP62256 183 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 UBXN2AP68543 259 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 PRR16Q569H4 304 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 POTEDQ86YR6 584 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 HAS1Q92839 578 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 SLC5A5Q92911 643 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 APBA2Q99767 749 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 SENP7Q9BQF6 1050 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 VTA1Q9NP79 307 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 TBC1D22BQ9NU19 505 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 LMBRD1Q9NUN5 540 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
APEX1-212ENST00000556054 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 RBM47A0AV96 593 aaKnown RBP13.56□□□□□ -0.24
APEX1-212ENST00000556054 MSH4O15457 936 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 PRPF40AO75400 957 aaKnown RBP13.56□□□□□ -0.24
APEX1-212ENST00000556054 RGS20O76081 388 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 CMA1P23946 247 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 ME1P48163 572 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 MTMR1Q13613 665 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 GIMAP8Q8ND71 665 aaPredicted RBP13.56□□□□□ -0.24
APEX1-212ENST00000556054 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 TINF2Q9BSI4 451 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 NFASCO94856 1347 aa13.56□□□□□ -0.24
APEX1-212ENST00000556054 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
APEX1-212ENST00000556054 PSMD10O75832 226 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 ARP10275 920 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 MARCKSP29966 332 aaPredicted RBP13.55□□□□□ -0.24
APEX1-212ENST00000556054 B3GNT9Q6UX72 402 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 WDR11Q9BZH6 1224 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 KATNBL1Q9H079 304 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
APEX1-212ENST00000556054 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
APEX1-212ENST00000556054 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
APEX1-212ENST00000556054 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
APEX1-212ENST00000556054 MARCH6O60337 910 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
APEX1-212ENST00000556054 TXKP42681 527 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 NFKBIBQ15653 356 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 IL17AQ16552 155 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 RESP18Q5W5W9 173 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 OTOP1Q7RTM1 612 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 KCTD17Q8N5Z5 321 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 ARHGAP39Q9C0H5 1083 aa13.54□□□□□ -0.24
APEX1-212ENST00000556054 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.54□□□□□ -0.24
APEX1-212ENST00000556054 ZSWIM8A7E2V4 1837 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 VWA3AA6NCI4 1184 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 MBD3O95983 291 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 KCNA2P16389 499 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 FLT3LGP49771 235 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 SPIRE1Q08AE8 756 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 NEDD9Q14511 834 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
APEX1-212ENST00000556054 LRCH2Q5VUJ6 765 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 PXYLP1Q8TE99 480 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
APEX1-212ENST00000556054 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
APEX1-212ENST00000556054 TEKT3Q9BXF9 490 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 CCSER1Q9C0I3 900 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 CSRNP2Q9H175 543 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
APEX1-212ENST00000556054 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.25
APEX1-212ENST00000556054 GAS7O60861 476 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 CYP2B6P20813 491 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 MUTP22033 750 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 KRT76Q01546 638 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms