RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FAM20AQ96MK3 541 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 NUDT12Q9BQG2 462 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 JADE2Q9NQC1 790 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 FBXO2Q9UK22 296 aaPredicted RBP12.48□□□□□ -0.41
TMEM260-208ENST00000555905 UBIAD1Q9Y5Z9 338 aa12.48□□□□□ -0.41
TMEM260-208ENST00000555905 ASTN1O14525 1302 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 VWA3AA6NCI4 1184 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 MAFGO15525 162 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 ITGB5P18084 799 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 EDNRBP24530 442 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 RGS2P41220 211 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 TXKP42681 527 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 PSMC4P43686 418 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 MTMR1Q13613 665 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 LENG9Q96B70 501 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 GPRASP2Q96D09 838 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-208ENST00000555905 CDHR1Q96JP9 859 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 RAB34Q9BZG1 259 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 KCNMB3Q9NPA1 279 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
TMEM260-208ENST00000555905 LRRC37A2A6NM11 1700 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 DOCK3Q8IZD9 2030 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 A0A1W2PQ27 194 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 A0A1W2PQ64 194 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 A0A1W2PQD8 194 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 MSH4O15457 936 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 GADD45BO75293 160 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-208ENST00000555905 LONP1P36776 959 aaKnown RBP12.46□□□□□ -0.41
TMEM260-208ENST00000555905 ARHGEF6Q15052 776 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 AXDND1Q5T1B0 1012 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-208ENST00000555905 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
TMEM260-208ENST00000555905 MORC4Q8TE76 937 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 HAS1Q92839 578 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 FGD4Q96M96 766 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 CLIC6Q96NY7 704 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-208ENST00000555905 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.41
TMEM260-208ENST00000555905 KIAA1217Q5T5P2 1943 aa12.46□□□□□ -0.42
TMEM260-208ENST00000555905 GPR25O00155 361 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 IPO5O00410 1097 aaKnown RBP12.45□□□□□ -0.42
TMEM260-208ENST00000555905 MBD3O95983 291 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 HOXC6P09630 235 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 ARP10275 920 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 CMA1P23946 247 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 HOXD10P28358 340 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 TECP42680 631 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 IL17AQ16552 155 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-208ENST00000555905 LRCH2Q5VUJ6 765 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 MAMDC4Q6UXC1 1216 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 ARMCX2Q7L311 632 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 MRPS27Q92552 414 aaKnown RBP12.45□□□□□ -0.42
TMEM260-208ENST00000555905 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 USP6NLQ92738 828 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 MAML3Q96JK9 1138 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 AK8Q96MA6 479 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 UIMC1Q96RL1 719 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 RIT2Q99578 217 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 APBA2Q99767 749 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-208ENST00000555905 AGO4Q9HCK5 861 aaKnown RBP12.45□□□□□ -0.42
TMEM260-208ENST00000555905 FAM13BQ9NYF5 915 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 GJD2Q9UKL4 321 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 MCM3APO60318 1980 aa12.45□□□□□ -0.42
TMEM260-208ENST00000555905 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 GAS7O60861 476 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 FKTNO75072 461 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 GNRH1P01148 92 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 CYP2B6P20813 491 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 CTGFP29279 349 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 TXLNAP40222 546 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 GRIN1Q05586 938 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 PDIA5Q14554 519 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 RESP18Q5W5W9 173 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 FSIP1Q8NA03 581 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 TINF2Q9BSI4 451 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 TBC1D22BQ9NU19 505 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms