RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AGPAT5Q9NUQ2 364 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 HDAC6Q9UBN7 1215 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 THSD7AQ9UPZ6 1657 aa7.77□□□□□ -1.16
TDP1-213ENST00000555880 MACROD2A1Z1Q3 448 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MARCH6O60337 910 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 TFRCP02786 760 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 HNRNPH2P55795 449 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 PSMD2Q13200 908 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 PDIA5Q14554 519 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 GRIK5Q16478 980 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MAN2A1Q16706 1144 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MIIPQ5JXC2 388 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MFSD14BQ5SR56 506 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 CENPPQ6IPU0 288 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 PPP1R18Q6NYC8 613 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 GUF1Q8N442 669 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 GOLGA5Q8TBA6 731 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 LRRC15Q8TF66 581 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 EEF2KMTQ96G04 330 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 CAPZA3Q96KX2 299 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 IFIH1Q9BYX4 1025 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 NDST4Q9H3R1 872 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 CD209Q9NNX6 404 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 SLC39A2Q9NP94 309 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 JRKLQ9Y4A0 524 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 USP17L5A8MUK1 530 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 AKR1B10O60218 316 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 IL1R1P14778 569 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 HNRNPH3P31942 346 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 KLK7P49862 253 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 GPSM2P81274 684 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 GRB10Q13322 594 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 ZSCAN26Q16670 478 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MUM1L1Q5H9M0 696 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 C2CD5Q86YS7 1000 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 SNX29Q8TEQ0 813 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 BBXQ8WY36 941 aaPredicted RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 GPR101Q96P66 508 aaPredicted RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 MMS19Q96T76 1030 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 CRACR2AQ9BSW2 395 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MMTAG2Q9BU76 263 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 SEMA6BQ9H3T3 888 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 RIOX1Q9H6W3 641 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 MMRN2Q9H8L6 949 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 RIC8AQ9NPQ8 531 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 LUC7LQ9NQ29 371 aaKnown RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 FAM207AQ9NSI2 230 aaPredicted RBP7.77□□□□□ -1.17
TDP1-213ENST00000555880 TMEM260Q9NX78 707 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
TDP1-213ENST00000555880 PLIN4Q96Q06 1357 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 FRMPD2Q68DX3 1309 aaPredicted RBP7.76□□□□□ -1.17
TDP1-213ENST00000555880 LY75O60449 1722 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 SRGAP2O75044 1071 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 TRIM37O94972 964 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 IVLP07476 585 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 PDHBP11177 359 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 CAPN2P17655 700 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 TNNI2P48788 182 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 KIF11P52732 1056 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 GYS2P54840 703 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 CYP27A1Q02318 531 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 SEPT2Q15019 361 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 FOXR2Q6PJQ5 311 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 CACNA2D4Q7Z3S7 1137 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 RUBCNQ92622 972 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 RAD54LQ92698 747 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 CUL5Q93034 780 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 MTMR9Q96QG7 549 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 PURBQ96QR8 312 aaKnown RBP7.76□□□□□ -1.17
TDP1-213ENST00000555880 NAP1L4Q99733 375 aaKnown RBP7.76□□□□□ -1.17
TDP1-213ENST00000555880 ADAM33Q9BZ11 813 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 TANGO6Q9C0B7 1094 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 LACRTQ9GZZ8 138 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 UBA5Q9GZZ9 404 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
TDP1-213ENST00000555880 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 MTMR4Q9NYA4 1195 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 VPS9D1Q9Y2B5 631 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 FAN1Q9Y2M0 1017 aa7.76□□□□□ -1.17
TDP1-213ENST00000555880 GAKO14976 1311 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 KDM3AQ9Y4C1 1321 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
TDP1-213ENST00000555880 PNMA6FA0A0J9YX94 578 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 MYMKA6NI61 221 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 RASSF10A6NK89 507 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 TTLL1O95922 423 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 GCFC2P16383 781 aaKnown RBP7.75□□□□□ -1.17
TDP1-213ENST00000555880 ACTN2P35609 894 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 MRPL12P52815 198 aaKnown RBP7.75□□□□□ -1.17
TDP1-213ENST00000555880 RHBDL3P58872 404 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 CCDC181Q5TID7 509 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 PPP4R3AQ6IN85 833 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
TDP1-213ENST00000555880 MYOCDQ8IZQ8 938 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms