RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 WNT8AQ9H1J5 351 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 PSEN2P49810 448 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 APOBRQ0VD83 1088 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 UBE2SQ16763 222 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 PCNX4Q63HM2 1172 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 FAM109BQ6ICB4 259 aaPredicted RBP21.16■□□□□ 0.98
NEDD1-208ENST00000555806 BRF1Q92994 677 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 SCLYQ96I15 445 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 FAM161BQ96MY7 647 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 INPP4AQ96PE3 977 aaPredicted RBP21.16■□□□□ 0.98
NEDD1-208ENST00000555806 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 MTMR10Q9NXD2 777 aa21.16■□□□□ 0.98
NEDD1-208ENST00000555806 SPDYE3A6NKU9 549 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 FIBPO43427 364 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 PSMA5P28066 241 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 METAP2P50579 478 aaKnown RBP eCLIP21.15■□□□□ 0.98
NEDD1-208ENST00000555806 RCAN1P53805 252 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 NAPAP54920 295 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 MFSD10Q14728 455 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 PTGISQ16647 500 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 HSDL1Q3SXM5 330 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 XRRA1Q6P2D8 792 aa21.15■□□□□ 0.98
NEDD1-208ENST00000555806 V9GY48 417 aaPredicted RBP21.15■□□□□ 0.98
NEDD1-208ENST00000555806 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 NOP56O00567 594 aaKnown RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 F2P00734 622 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 RPS6KB1P23443 525 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 CDC27P30260 824 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 ICAM3P32942 547 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 NEDD9Q14511 834 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 KIAA0753Q2KHM9 967 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 NLRX1Q86UT6 975 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 RPUSD2Q8IZ73 545 aaKnown RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 C7orf31Q8N865 590 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 RETREG2Q8NC44 543 aa21.14■□□□□ 0.97
NEDD1-208ENST00000555806 MTIF3Q9H2K0 278 aaKnown RBP21.14■□□□□ 0.97
NEDD1-208ENST00000555806 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 PPFIA4O75335 1185 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 FGBP02675 491 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 HOXD8P13378 290 aaPredicted RBP21.13■□□□□ 0.97
NEDD1-208ENST00000555806 FUT2Q10981 343 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 SEMA3FQ13275 785 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 GDF6Q6KF10 455 aaPredicted RBP21.13■□□□□ 0.97
NEDD1-208ENST00000555806 PPP1R18Q6NYC8 613 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 CYFIP1Q7L576 1253 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 SESTD1Q86VW0 696 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 EHMT1Q9H9B1 1298 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 FAM217BQ9NTX9 383 aaPredicted RBP21.13■□□□□ 0.97
NEDD1-208ENST00000555806 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
NEDD1-208ENST00000555806 hCG_1984214I3L0E3 225 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 EPB41L2O43491 1005 aaKnown RBP21.12■□□□□ 0.97
NEDD1-208ENST00000555806 ADD1P35611 737 aaKnown RBP21.12■□□□□ 0.97
NEDD1-208ENST00000555806 BFSP2Q13515 415 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 OTOP2Q7RTS6 562 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 DEFB128Q7Z7B8 93 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 CCDC155Q8N6L0 562 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 ZNF713Q8N859 430 aaPredicted RBP21.12■□□□□ 0.97
NEDD1-208ENST00000555806 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 BCAS3Q9H6U6 928 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 GTF2IRD1Q9UHL9 959 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 PCDHA6Q9UN73 950 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 PCDHA8Q9Y5H6 950 aa21.12■□□□□ 0.97
NEDD1-208ENST00000555806 HAS3O00219 553 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 PITPNM1O00562 1244 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 ADCY7P51828 1080 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 RASIP1Q5U651 963 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 TYW1BQ6NUM6 668 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 METTL7BQ6UX53 244 aa21.11■□□□□ 0.97
NEDD1-208ENST00000555806 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
NEDD1-208ENST00000555806 TANC1Q9C0D5 1861 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 DOCK5Q9H7D0 1870 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 STXBP3O00186 592 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 SP4Q02446 784 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 CAGE1Q8TC20 777 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 GPRASP2Q96D09 838 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 RIC8AQ9NPQ8 531 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 BARHL2Q9NY43 387 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 CXXC1Q9P0U4 656 aaPredicted RBP21.1■□□□□ 0.97
NEDD1-208ENST00000555806 STXBP5LQ9Y2K9 1186 aa21.1■□□□□ 0.97
NEDD1-208ENST00000555806 SMCO2A6NFE2 343 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 ZBBXA8MT70 800 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 GRXCR1A8MXD5 290 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 LGALS2P05162 132 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 PFKMP08237 780 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 IQCF3P0C7M6 154 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 DNAJB2P25686 324 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 RFC2P35250 354 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 FBXL16Q8N461 479 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 CDHR1Q96JP9 859 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 PGBD1Q96JS3 809 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 GUCD1Q96NT3 240 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 SENP7Q9BQF6 1050 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 C16orf70Q9BSU1 422 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 USP26Q9BXU7 913 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 SEMA6BQ9H3T3 888 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms