RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 UMODL1Q5DID0 1318 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 SPATA31C2B4DYI2 1134 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 STXBP3O00186 592 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 CSF2RAP15509 400 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 UBA1P22314 1058 aaKnown RBP17.31■□□□□ 0.36
IFT43-211ENST00000555677 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
IFT43-211ENST00000555677 NAPAP54920 295 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 SEMA3FQ13275 785 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
IFT43-211ENST00000555677 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 TMEM199Q8N511 208 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 HIPK3Q9H422 1215 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 MLXIPQ9HAP2 919 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
IFT43-211ENST00000555677 NID2Q14112 1375 aa17.3■□□□□ 0.36
IFT43-211ENST00000555677 PPFIA4O75335 1185 aa17.3■□□□□ 0.36
IFT43-211ENST00000555677 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
IFT43-211ENST00000555677 PTPN11Q06124 597 aaPredicted RBP17.3■□□□□ 0.36
IFT43-211ENST00000555677 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
IFT43-211ENST00000555677 FAM47CQ5HY64 1035 aa17.3■□□□□ 0.36
IFT43-211ENST00000555677 SPATA33Q96N06 139 aa17.3■□□□□ 0.36
IFT43-211ENST00000555677 NOC4LQ9BVI4 516 aaKnown RBP17.3■□□□□ 0.36
IFT43-211ENST00000555677 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 FIBPO43427 364 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 CYP2C9P11712 490 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
IFT43-211ENST00000555677 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
IFT43-211ENST00000555677 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
IFT43-211ENST00000555677 NTRK3Q16288 839 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 PKN1Q16512 942 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 GPR153Q6NV75 609 aa17.29■□□□□ 0.36
IFT43-211ENST00000555677 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
IFT43-211ENST00000555677 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
IFT43-211ENST00000555677 UPF3BQ9BZI7 483 aaKnown RBP17.29■□□□□ 0.36
IFT43-211ENST00000555677 HAS3O00219 553 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
IFT43-211ENST00000555677 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 ACRP10323 421 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 SCG2P13521 617 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 ITGB5P18084 799 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 ADCY7P51828 1080 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 CCL23P55773 120 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 NEDD9Q14511 834 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 TMEM240Q5SV17 173 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 CYFIP1Q7L576 1253 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 NLRX1Q86UT6 975 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 PHKBQ93100 1093 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
IFT43-211ENST00000555677 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 WNT8AQ9H1J5 351 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 UBIAD1Q9Y5Z9 338 aa17.28■□□□□ 0.36
IFT43-211ENST00000555677 KAT6AQ92794 2004 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 ATP9AO75110 1047 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 F2P00734 622 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 CLK2P49760 499 aaKnown RBP17.27■□□□□ 0.36
IFT43-211ENST00000555677 PSEN2P49810 448 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 MFSD10Q14728 455 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 PTGISQ16647 500 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.36
IFT43-211ENST00000555677 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 SENP7Q9BQF6 1050 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 C16orf70Q9BSU1 422 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 NCOA5Q9HCD5 579 aaKnown RBP17.27■□□□□ 0.36
IFT43-211ENST00000555677 IL23AQ9NPF7 189 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 TELO2Q9Y4R8 837 aa17.27■□□□□ 0.36
IFT43-211ENST00000555677 GBF1Q92538 1859 aa17.27■□□□□ 0.35
IFT43-211ENST00000555677 TANC1Q9C0D5 1861 aa17.27■□□□□ 0.35
IFT43-211ENST00000555677 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
IFT43-211ENST00000555677 IFNAR1P17181 557 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 METTL7BQ6UX53 244 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 ZNF365Q70YC5 407 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
IFT43-211ENST00000555677 SCLYQ96I15 445 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 RNPC3Q96LT9 517 aaKnown RBP17.26■□□□□ 0.35
IFT43-211ENST00000555677 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
IFT43-211ENST00000555677 NOP56O00567 594 aaKnown RBP17.25■□□□□ 0.35
IFT43-211ENST00000555677 MTMR1Q13613 665 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms