RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 GDF6Q6KF10 455 aaPredicted RBP17.78■□□□□ 0.44
SNX6-205ENST00000555648 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 LRRC2Q9BYS8 371 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 RTEL1Q9NZ71 1219 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 HDAC6Q9UBN7 1215 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 GTF2IRD1Q9UHL9 959 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 DNAH12Q6ZR08 3092 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 CDC45O75419 566 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 RGS20O76081 388 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 PLEKHA8P1O95397 391 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
SNX6-205ENST00000555648 F2P00734 622 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 SELPP16109 830 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 NLRX1Q86UT6 975 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 MICU3Q86XE3 530 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
SNX6-205ENST00000555648 NEK1Q96PY6 1258 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 PSTPIP2Q9H939 334 aa17.77■□□□□ 0.44
SNX6-205ENST00000555648 KIF28PB7ZC32 967 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 FIBPO43427 364 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 KCNJ6P48051 423 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 RABGGTBP53611 331 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 FGD1P98174 961 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 HSDL1Q3SXM5 330 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 PPP2R2DQ66LE6 453 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 XRRA1Q6P2D8 792 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 USP17L6PQ6QN14 398 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 LRRC8DQ7L1W4 858 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 CMTR1Q8N1G2 835 aaKnown RBP17.76■□□□□ 0.43
SNX6-205ENST00000555648 FANCBQ8NB91 859 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 SLC9A7Q96T83 725 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 PRDM12Q9H4Q4 367 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
SNX6-205ENST00000555648 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 IGFBP4P22692 258 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 SP2Q02086 613 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 PTK7Q13308 1070 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 KRT32Q14532 448 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 METTL7BQ6UX53 244 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 HEATR3Q7Z4Q2 680 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 INPP4AQ96PE3 977 aaPredicted RBP17.75■□□□□ 0.43
SNX6-205ENST00000555648 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
SNX6-205ENST00000555648 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
SNX6-205ENST00000555648 YBX2Q9Y2T7 364 aaKnown RBP17.75■□□□□ 0.43
SNX6-205ENST00000555648 SPDYE3A6NKU9 549 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 SPATA31C2B4DYI2 1134 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 HAS3O00219 553 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
SNX6-205ENST00000555648 ICAM3P32942 547 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 MRPS9P82933 396 aaKnown RBP17.74■□□□□ 0.43
SNX6-205ENST00000555648 PCNX4Q63HM2 1172 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 CYFIP1Q7L576 1253 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 GIMAP8Q8ND71 665 aaPredicted RBP17.74■□□□□ 0.43
SNX6-205ENST00000555648 PHOSPHO2Q8TCD6 241 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 GPKOWQ92917 476 aaPredicted RBP eCLIP17.74■□□□□ 0.43
SNX6-205ENST00000555648 CDHR1Q96JP9 859 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
SNX6-205ENST00000555648 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
SNX6-205ENST00000555648 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 hCG_1642624A0A1W2PR95 340 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 C17orf102A2RUQ5 167 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 H3BRB1 525 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 MEIS2O14770 477 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 CKBP12277 381 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 SP4Q02446 784 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 DHX32Q7L7V1 743 aaKnown RBP17.73■□□□□ 0.43
SNX6-205ENST00000555648 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 TUT1Q9H6E5 874 aaKnown RBP17.73■□□□□ 0.43
SNX6-205ENST00000555648 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
SNX6-205ENST00000555648 SCN10AQ9Y5Y9 1956 aa17.73■□□□□ 0.43
SNX6-205ENST00000555648 ZBTB43O43298 467 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 LGALS2P05162 132 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
SNX6-205ENST00000555648 GNAT1P11488 350 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 MYOGP15173 224 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 RTN1Q16799 776 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 ATP6V0A1Q93050 837 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 VWCEQ96DN2 955 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 C16orf70Q9BSU1 422 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 ZBED2Q9BTP6 218 aa17.72■□□□□ 0.43
SNX6-205ENST00000555648 THPOP40225 353 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 ZNF200P98182 395 aaPredicted RBP17.71■□□□□ 0.43
SNX6-205ENST00000555648 RBL2Q08999 1139 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
SNX6-205ENST00000555648 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
SNX6-205ENST00000555648 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
SNX6-205ENST00000555648 MYH6P13533 1939 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
SNX6-205ENST00000555648 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms