RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PP2D1A8MPX8 630 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 MSH4O15457 936 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 CDC25AP30304 524 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 INHBEP58166 350 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 SETQ01105 290 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 SREBF2Q12772 1141 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 KCTD2Q14681 263 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 CEP55Q53EZ4 464 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 KRBA2Q6ZNG9 492 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 CKAP2LQ8IYA6 745 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 SHCBP1Q8NEM2 672 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 CYP2W1Q8TAV3 490 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 NSUN6Q8TEA1 469 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 DHX58Q96C10 678 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 FAM20AQ96MK3 541 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 MMP19Q99542 508 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 PYM1Q9BRP8 204 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 CCDC39Q9UFE4 941 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 SERTAD1Q9UHV2 236 aa10.89□□□□□ -0.67
HNRNPC-220ENST00000555585 LCTP09848 1927 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 IGF2BP3O00425 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 MEIS1O00470 390 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 NR3C2P08235 984 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ARP10275 920 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ZNF445P59923 1031 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 PDIA5Q14554 519 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 GSE1Q14687 1217 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 LONRF3Q496Y0 759 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 XRRA1Q6P2D8 792 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 LRSAM1Q6UWE0 723 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CEP57L1Q8IYX8 460 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 IGSF22Q8N9C0 903 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 DNERQ8NFT8 737 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ETNPPLQ8TBG4 499 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 LENG9Q96B70 501 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CALML4Q96GE6 196 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CDK5RAP3Q96JB5 506 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ZNF577Q9BSK1 485 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 CCSER1Q9C0I3 900 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 PORCNQ9H237 461 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 EFCC1Q9HA90 598 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ZCCHC17Q9NP64 241 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 MORF4L1Q9UBU8 362 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ADD3Q9UEY8 706 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 USP25Q9UHP3 1055 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 UBIAD1Q9Y5Z9 338 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-220ENST00000555585 A0A087X0B3 334 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 POTEMA6NI47 508 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 B4DLN1 442 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 FCER1AP12319 257 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 STAT6P42226 847 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 ALDH5A1P51649 535 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 LRCH2Q5VUJ6 765 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 RRAGBQ5VZM2 374 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 CYP4F22Q6NT55 531 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 VSIG10LQ86VR7 867 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 IQUBQ8NA54 791 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 SNX29Q8TEQ0 813 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 PLIN2Q99541 437 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 TEKT3Q9BXF9 490 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 CPA4Q9UI42 421 aa10.87□□□□□ -0.67
HNRNPC-220ENST00000555585 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 GAS7O60861 476 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 PGK2P07205 417 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 PYGBP11216 843 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 BCRP11274 1271 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 ITGB5P18084 799 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 CCT6AP40227 531 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 PDE4DQ08499 809 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 MTMR1Q13613 665 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 STXBP2Q15833 593 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 DEFB115Q30KQ5 88 aa10.86□□□□□ -0.67
HNRNPC-220ENST00000555585 ERMNQ8TAM6 284 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms