RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 CCDC8Q9H0W5 538 aaPredicted RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 MAPK8IP1Q9UQF2 711 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 GNEQ9Y223 722 aaKnown RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 IVNS1ABPQ9Y6Y0 642 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 COL11A2P13942 1736 aaPredicted RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 TTC41PQ6P2S7 1318 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 FANCGO15287 622 aa7.67□□□□□ -1.18
LINC00643-203ENST00000555518 MMP10P09238 476 aa7.67□□□□□ -1.18
LINC00643-203ENST00000555518 MAP1SQ66K74 1059 aaPredicted RBP7.67□□□□□ -1.18
LINC00643-203ENST00000555518 LDHAL6AQ6ZMR3 332 aa7.67□□□□□ -1.18
LINC00643-203ENST00000555518 ECHDC1Q9NTX5 307 aa7.67□□□□□ -1.18
LINC00643-203ENST00000555518 LRRC37AA6NMS7 1700 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 A0A1B0GUL7 405 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 GPR182O15218 404 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 IGHA2P01877 340 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
LINC00643-203ENST00000555518 ADORA1P30542 326 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 SERPINB4P48594 390 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 TAF7LQ5H9L4 462 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 TMEM67Q5HYA8 995 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 MPZL3Q6UWV2 235 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 CYFIP1Q7L576 1253 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 CILP2Q8IUL8 1156 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 EPS8L3Q8TE67 593 aaKnown RBP7.66□□□□□ -1.18
LINC00643-203ENST00000555518 KIRREL1Q96J84 757 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
LINC00643-203ENST00000555518 FOXQ1Q9C009 403 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 BCL11AQ9H165 835 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 PRDM7Q9NQW5 492 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 PRDM5Q9NQX1 630 aaPredicted RBP7.66□□□□□ -1.18
LINC00643-203ENST00000555518 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 CACNA2D2Q9NY47 1150 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 MROH5Q6ZUA9 1318 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 PITPNM2Q9BZ72 1349 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 IRS2Q9Y4H2 1338 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 LTBP1Q14766 1721 aa7.66□□□□□ -1.18
LINC00643-203ENST00000555518 SNAP23O00161 211 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 CDC45O75419 566 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 GLRX3O76003 335 aaKnown RBP7.65□□□□□ -1.18
LINC00643-203ENST00000555518 PDE8BO95263 885 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 ATP5JP18859 108 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 CFPP27918 469 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 IGHMBP2P38935 993 aaKnown RBP7.65□□□□□ -1.18
LINC00643-203ENST00000555518 TIMM10P62072 90 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 ST5P78524 1137 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 CHRNDQ07001 517 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 ZNF252P-AS1Q0IIN9 211 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 NKPD1Q17RQ9 610 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 METTL24Q5JXM2 366 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 C10orf71Q711Q0 1435 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 ANKRD18AQ8IVF6 992 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 LRRC56Q8IYG6 542 aaPredicted RBP7.65□□□□□ -1.18
LINC00643-203ENST00000555518 GPBAR1Q8TDU6 330 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 RBCK1Q9BYM8 510 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 CNNM1Q9NRU3 951 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 AKAP11Q9UKA4 1901 aa7.65□□□□□ -1.18
LINC00643-203ENST00000555518 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 NFIBO00712 420 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 ERC2O15083 957 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 RPS8P62241 208 aaKnown RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 GRAPQ13588 217 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 PUM3Q15397 648 aaKnown RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 ATP2B3Q16720 1220 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 SYDE1Q6ZW31 735 aaPredicted RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 NPAS4Q8IUM7 802 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 GRAPLQ8TC17 118 aaPredicted RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 LIN37Q96GY3 246 aaPredicted RBP7.64□□□□□ -1.19
LINC00643-203ENST00000555518 MPHOSPH8Q99549 860 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 BRIP1Q9BX63 1249 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 CEP44Q9C0F1 390 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 IL25Q9H293 177 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 MINPP1Q9UNW1 487 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 AKAP2Q9Y2D5 859 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 KIAA1551Q9HCM1 1747 aa7.64□□□□□ -1.19
LINC00643-203ENST00000555518 ZNF804BA4D1E1 1349 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 AK9Q5TCS8 1911 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 TAF5LO75529 589 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 MAP4K4O95819 1239 aaPredicted RBP7.63□□□□□ -1.19
LINC00643-203ENST00000555518 SRGNP10124 158 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 CHMLP26374 656 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 GDNFP39905 211 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 C22orf34Q6ZV56 151 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 DDX46Q7L014 1031 aaKnown RBP7.63□□□□□ -1.19
LINC00643-203ENST00000555518 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
LINC00643-203ENST00000555518 LPIN2Q92539 896 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 EDC3Q96F86 508 aaKnown RBP7.63□□□□□ -1.19
LINC00643-203ENST00000555518 ZNF512BQ96KM6 892 aaPredicted RBP7.63□□□□□ -1.19
LINC00643-203ENST00000555518 CRAMP1Q96RY5 1269 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 HAUS7Q99871 368 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 BCO2Q9BYV7 579 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 BOLA2Q9H3K6 86 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 CBX8Q9HC52 389 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 KIF13BQ9NQT8 1826 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 DUOX1Q9NRD9 1551 aa7.63□□□□□ -1.19
LINC00643-203ENST00000555518 COL1A1P02452 1464 aaPredicted RBP7.62□□□□□ -1.19
LINC00643-203ENST00000555518 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms