RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PPP4R3AQ6IN85 833 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 NLRX1Q86UT6 975 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 GAS2L3Q86XJ1 694 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 PIGOQ8TEQ8 1089 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 MYPNQ86TC9 1320 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 BACH1O14867 736 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 KRT18P05783 430 aaKnown RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 LONP1P36776 959 aaKnown RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 APLP1P51693 650 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 SREBF2Q12772 1141 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 GJC2Q5T442 439 aaPredicted RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 FBXO16Q8IX29 292 aaPredicted RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 IQUBQ8NA54 791 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 CLSTN2Q9H4D0 955 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 MAPK8IP1Q9UQF2 711 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
NEK9-205ENST00000555405 PRAMEF19Q5SWL8 479 aa11.46□□□□□ -0.57
NEK9-205ENST00000555405 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
NEK9-205ENST00000555405 KLHL10Q6JEL2 608 aa11.46□□□□□ -0.57
NEK9-205ENST00000555405 BANK1Q8NDB2 785 aa11.46□□□□□ -0.57
NEK9-205ENST00000555405 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
NEK9-205ENST00000555405 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
NEK9-205ENST00000555405 POTEFA5A3E0 1075 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 E9PMD0 336 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 EML1O00423 815 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 COBLO75128 1261 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 MCM6Q14566 821 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.58
NEK9-205ENST00000555405 MCTP2Q6DN12 878 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 POTEGQ6S5H5 508 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 CYFIP1Q7L576 1253 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 MIER3Q7Z3K6 550 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 ENGASEQ8NFI3 743 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 MTMR9Q96QG7 549 aa11.46□□□□□ -0.58
NEK9-205ENST00000555405 ZBTB39O15060 712 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 ALDH5A1P51649 535 aaPredicted RBP11.45□□□□□ -0.58
NEK9-205ENST00000555405 NOGQ13253 232 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 SLFN12Q8IYM2 578 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 FAM177A1Q8N128 213 aaPredicted RBP11.45□□□□□ -0.58
NEK9-205ENST00000555405 NAP1L4Q99733 375 aaKnown RBP11.45□□□□□ -0.58
NEK9-205ENST00000555405 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 LY6KQ17RY6 165 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 DNAJC25Q9H1X3 360 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 MROH8Q9H579 483 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 PDGFCQ9NRA1 345 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 TELO2Q9Y4R8 837 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 VEGFBP49765 207 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 GNPTABQ3T906 1256 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 RGS22Q8NE09 1264 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 COPS5Q92905 334 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 MLXIPQ9HAP2 919 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 PCDHA5Q9Y5H7 936 aa11.45□□□□□ -0.58
NEK9-205ENST00000555405 LAD1O00515 517 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 CNGA1P29973 690 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
NEK9-205ENST00000555405 LENG9Q96B70 501 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 TSPY26PQ9H489 355 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 TBC1D7Q9P0N9 293 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 PFASO15067 1338 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 UNCXA6NJT0 531 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 FAM155AB1AL88 458 aaPredicted RBP11.44□□□□□ -0.58
NEK9-205ENST00000555405 PSMC4P43686 418 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 PCNX4Q63HM2 1172 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
NEK9-205ENST00000555405 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 PPP1R13LQ8WUF5 828 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 UNC45AQ9H3U1 944 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 HOOK1Q9UJC3 728 aaKnown RBP11.44□□□□□ -0.58
NEK9-205ENST00000555405 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 TMEM150BA6NC51 233 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 TLR2O60603 784 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 MED24O75448 989 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 CCDC192P0DO97 292 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 CYP2C19P33261 490 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 ASIC1P78348 528 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 ECM1Q16610 540 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 KCNK18Q7Z418 384 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 ETNPPLQ8TBG4 499 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 JADE2Q9NQC1 790 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 DISC1Q9NRI5 854 aa11.44□□□□□ -0.58
NEK9-205ENST00000555405 INHBEP58166 350 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 PSMC6P62333 389 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms