RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ICAM4Q14773 271 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 TCEAL1Q15170 157 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 SURF1Q15526 300 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 GNPTABQ3T906 1256 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 CRB2Q5IJ48 1285 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 CPNE8Q86YQ8 564 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 TTLL6Q8N841 843 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 KLC2Q9H0B6 622 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 PPP4R1LQ9P1A2 415 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
VRK1-205ENST00000555402 LTBP3Q9NS15 1303 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 NTRK1P04629 796 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 NCAPHQ15003 741 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 PRR31Q5SQ13 230 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 ETV3LQ6ZN32 361 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 STK32CQ86UX6 486 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 PCED1AQ9H1Q7 454 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 CD248Q9HCU0 757 aa7.8□□□□□ -1.16
VRK1-205ENST00000555402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.8□□□□□ -1.16
VRK1-205ENST00000555402 ANKRD62A6NC57 917 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 STXBP3O00186 592 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 DDX3XO00571 662 aaKnown RBP eCLIP7.79□□□□□ -1.16
VRK1-205ENST00000555402 LAMTOR5O43504 91 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 B4GALT3O60512 393 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 VAMP4O75379 141 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 AMHP03971 560 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 SLC7A5Q01650 507 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 KIAA1211LQ6NV74 962 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 CD300LDQ6UXZ3 194 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 FAM26EQ8N5C1 309 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 LCORQ96JN0 433 aaPredicted RBP7.79□□□□□ -1.16
VRK1-205ENST00000555402 RNPC3Q96LT9 517 aaKnown RBP7.79□□□□□ -1.16
VRK1-205ENST00000555402 PFDN2Q9UHV9 154 aa7.79□□□□□ -1.16
VRK1-205ENST00000555402 ZNF214Q9UL59 606 aaPredicted RBP7.79□□□□□ -1.16
VRK1-205ENST00000555402 CBFA2T2O43439 604 aa7.78□□□□□ -1.16
VRK1-205ENST00000555402 SEPHS1P49903 392 aa7.78□□□□□ -1.16
VRK1-205ENST00000555402 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
VRK1-205ENST00000555402 NPEPPSL1A6NEC2 478 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 C2orf71A6NGG8 1288 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 FUCA1P04066 466 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 PAMP19021 973 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
VRK1-205ENST00000555402 HSD3B2P26439 372 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 DPY19L1Q2PZI1 675 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 EGFLAMQ63HQ2 1017 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 MRM1Q6IN84 353 aaKnown RBP7.77□□□□□ -1.17
VRK1-205ENST00000555402 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 ADCY4Q8NFM4 1077 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 PUS7Q96PZ0 661 aaKnown RBP7.77□□□□□ -1.17
VRK1-205ENST00000555402 WHRNQ9P202 907 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.77□□□□□ -1.17
VRK1-205ENST00000555402 KDM2BQ8NHM5 1336 aa7.77□□□□□ -1.17
VRK1-205ENST00000555402 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
VRK1-205ENST00000555402 ITGA1P56199 1179 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
VRK1-205ENST00000555402 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 MIB1Q86YT6 1006 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 ST13P5Q8NFI4 369 aaPredicted RBP7.76□□□□□ -1.17
VRK1-205ENST00000555402 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 BACE2Q9Y5Z0 518 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 HS3ST3A1Q9Y663 406 aa7.76□□□□□ -1.17
VRK1-205ENST00000555402 SBNO2Q9Y2G9 1366 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 NPHP3-ACAD11A0A0J9YXS1 232 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 C7orf72A4D263 438 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 GPR42O15529 346 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 NPHS1O60500 1241 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 ZNF585AQ6P3V2 769 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 SPATC1Q76KD6 591 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 PLEKHH3Q7Z736 793 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 DCP2Q8IU60 420 aaKnown RBP7.75□□□□□ -1.17
VRK1-205ENST00000555402 PALM2Q8IXS6 379 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 PLEKHO2Q8TD55 490 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 DEF6Q9H4E7 631 aa7.75□□□□□ -1.17
VRK1-205ENST00000555402 TRBV23OR9-2A0A075B6M9 112 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 SGSM2O43147 1006 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 KLF10Q13118 480 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 ZC3H18Q86VM9 953 aaKnown RBP7.74□□□□□ -1.17
VRK1-205ENST00000555402 KLHL6Q8WZ60 621 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 APPBP2Q92624 585 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 HAUS7Q99871 368 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 AP5M1Q9H0R1 490 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 FANCLQ9NW38 375 aa7.74□□□□□ -1.17
VRK1-205ENST00000555402 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 AGRPO00253 132 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 ENPP3O14638 875 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 SUSD5O60279 629 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
VRK1-205ENST00000555402 CDC45O75419 566 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
VRK1-205ENST00000555402 SV2CQ496J9 727 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 CIR1Q86X95 450 aaPredicted RBP7.73□□□□□ -1.17
VRK1-205ENST00000555402 HOMER1Q86YM7 354 aa7.73□□□□□ -1.17
VRK1-205ENST00000555402 THAP3Q8WTV1 239 aaPredicted RBP7.73□□□□□ -1.17
VRK1-205ENST00000555402 NAT2P11245 290 aa7.72□□□□□ -1.17
VRK1-205ENST00000555402 RBM10P98175 930 aaKnown RBP7.72□□□□□ -1.17
VRK1-205ENST00000555402 AMPD2Q01433 879 aa7.72□□□□□ -1.17
VRK1-205ENST00000555402 C2orf27AQ580R0 203 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms