RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
VRK1-204ENST00000555351 GGPS1O95749 300 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 FGBP02675 491 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 RXRAP19793 462 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 UBA1P22314 1058 aaKnown RBP13.62□□□□□ -0.23
VRK1-204ENST00000555351 FUT2Q10981 343 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 RTN1Q16799 776 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 Q7L0L9 218 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 GIMAP8Q8ND71 665 aaPredicted RBP13.62□□□□□ -0.23
VRK1-204ENST00000555351 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 WNT8AQ9H1J5 351 aa13.62□□□□□ -0.23
VRK1-204ENST00000555351 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 MAFGO15525 162 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 PSMA5P28066 241 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 PSEN2P49810 448 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 SP2Q02086 613 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 METTL7BQ6UX53 244 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 NLRX1Q86UT6 975 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 GPRASP2Q96D09 838 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 SPATA33Q96N06 139 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 SEMA6BQ9H3T3 888 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 NOD1Q9Y239 953 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 SNX14Q9Y5W7 946 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 TANC1Q9C0D5 1861 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
VRK1-204ENST00000555351 KLF18A0A0U1RQI7 1052 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 FOSP01100 380 aaPredicted RBP13.6□□□□□ -0.23
VRK1-204ENST00000555351 CYP2C9P11712 490 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 CCL23P55773 120 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 MFSD10Q14728 455 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 PTGISQ16647 500 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
VRK1-204ENST00000555351 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
VRK1-204ENST00000555351 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 ACRP10323 421 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 ACTN1P12814 892 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 DNAJB2P25686 324 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 EVCP57679 992 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 FGD1P98174 961 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 PTK7Q13308 1070 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 RAB30Q15771 203 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
VRK1-204ENST00000555351 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
VRK1-204ENST00000555351 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 CTAGE1Q96RT6 745 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 C16orf70Q9BSU1 422 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 RIC8AQ9NPQ8 531 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
VRK1-204ENST00000555351 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
VRK1-204ENST00000555351 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
VRK1-204ENST00000555351 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 HOXC8P31273 242 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 SEMA3FQ13275 785 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 WWC2Q6AWC2 1192 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 TM6SF1Q9BZW5 370 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 TTYH1Q9H313 450 aaPredicted RBP13.58□□□□□ -0.24
VRK1-204ENST00000555351 BARHL2Q9NY43 387 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 UBIAD1Q9Y5Z9 338 aa13.58□□□□□ -0.24
VRK1-204ENST00000555351 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
VRK1-204ENST00000555351 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 H3BRB1 525 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 BAIAP3O94812 1187 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 ZNF286BP0CG31 522 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 SELPP16109 830 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 METAP2P50579 478 aaKnown RBP eCLIP13.57□□□□□ -0.24
VRK1-204ENST00000555351 NAPAP54920 295 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 AP3B2Q13367 1082 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 Q6ZUG5 572 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 PHOSPHO2Q8TCD6 241 aa13.57□□□□□ -0.24
VRK1-204ENST00000555351 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
VRK1-204ENST00000555351 TIFAQ96CG3 184 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms