RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NR1I2O75469 434 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ZNF76P36508 570 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
TDP1-211ENST00000555178 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 CEP55Q53EZ4 464 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 PPP4R3AQ6IN85 833 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 CAVIN1Q6NZI2 390 aaKnown RBP12.19□□□□□ -0.46
TDP1-211ENST00000555178 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 PLA2G4DQ86XP0 818 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 SRPRBQ9Y5M8 271 aaKnown RBP12.19□□□□□ -0.46
TDP1-211ENST00000555178 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 IGHA2P01877 340 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 ELNP15502 786 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 TXKP42681 527 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 NDUFA8P51970 172 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 CALCRLQ16602 461 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 COPS5Q92905 334 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 KCNMB3Q9NPA1 279 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 FOXN1O15353 648 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 PFKFB1P16118 471 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 CCND2P30279 289 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 FCGRTP55899 365 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 Q4G0T1 1027 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 TRIB2Q92519 343 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 LENG1Q96BZ8 264 aaPredicted RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
TDP1-211ENST00000555178 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 JADE2Q9NQC1 790 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
TDP1-211ENST00000555178 A0A087X0B3 334 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 DDX39AO00148 427 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 CUTAO60888 179 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 FKTNO75072 461 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 PDE4DQ08499 809 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 MAMDC4Q6UXC1 1216 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 TRPV1Q8NER1 839 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 LRRC15Q8TF66 581 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 TINF2Q9BSI4 451 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 PANK2Q9BZ23 570 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 DACT1Q9NYF0 836 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 A0A087WWV3 80 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 A0A1W2PQ27 194 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 A0A1W2PQ64 194 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 A0A1W2PQD8 194 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 POTEMA6NI47 508 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 EML1O00423 815 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 BMP15O95972 392 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 MBD3O95983 291 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 HOXC6P09630 235 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 TECP42680 631 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 STXBP2Q15833 593 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 MCTP2Q6DN12 878 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 IWS1Q96ST2 819 aa12.17□□□□□ -0.46
TDP1-211ENST00000555178 AGO4Q9HCK5 861 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
TDP1-211ENST00000555178 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
TDP1-211ENST00000555178 PTMSP20962 102 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 CMA1P23946 247 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 MTMR1Q13613 665 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 MOXD1Q6UVY6 613 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 FERMT2Q96AC1 680 aa12.16□□□□□ -0.46
TDP1-211ENST00000555178 SPATA31C2B4DYI2 1134 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
TDP1-211ENST00000555178 KCNA2P16389 499 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
TDP1-211ENST00000555178 DTHD1Q6ZMT9 781 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 FMR1NBQ8N0W7 255 aaPredicted RBP12.15□□□□□ -0.46
TDP1-211ENST00000555178 PDILTQ8N807 584 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
TDP1-211ENST00000555178 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 SRRDQ9UH36 339 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 VAV3Q9UKW4 847 aa12.15□□□□□ -0.46
TDP1-211ENST00000555178 HPSEQ9Y251 543 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms