RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 NT5C2P49902 561 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-210ENST00000554974 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.4
XRCC3-210ENST00000554974 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 DSCC1Q9BVC3 393 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 KATNAL1Q9BW62 490 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 AMNQ9BXJ7 453 aa17.52■□□□□ 0.4
XRCC3-210ENST00000554974 HAS3O00219 553 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 HIC1Q14526 733 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
XRCC3-210ENST00000554974 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
XRCC3-210ENST00000554974 ZNF618Q5T7W0 954 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 FAM117BQ6P1L5 589 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 TRAF7Q6Q0C0 670 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 ZFP91Q96JP5 570 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-210ENST00000554974 PDCD2LQ9BRP1 358 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 KRT23Q9C075 422 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 BRWD1Q9NSI6 2320 aa17.51■□□□□ 0.39
XRCC3-210ENST00000554974 MICAL3Q7RTP6 2002 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 GJB5O95377 273 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 PDE4AP27815 886 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 PTK7Q13308 1070 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 SLC35G1Q2M3R5 365 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 HSDL1Q3SXM5 330 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 CYB5R4Q7L1T6 521 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 HLA-CQ95604 372 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 CNNM2Q9H8M5 875 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 COG5Q9UP83 839 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 DOCK5Q9H7D0 1870 aa17.5■□□□□ 0.39
XRCC3-210ENST00000554974 ABHD14A-ACY1A0A1B0GW23 586 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 HIP1O00291 1037 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 ZBTB5O15062 677 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
XRCC3-210ENST00000554974 GGPS1O95749 300 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-210ENST00000554974 UBA1P22314 1058 aaKnown RBP17.49■□□□□ 0.39
XRCC3-210ENST00000554974 GHRHRQ02643 423 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 SEC23AQ15436 765 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 MYSM1Q5VVJ2 828 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
XRCC3-210ENST00000554974 MTMR8Q96EF0 704 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 MAD2L2Q9UI95 211 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
XRCC3-210ENST00000554974 BAZ2BQ9UIF8 2168 aaKnown RBP17.48■□□□□ 0.39
XRCC3-210ENST00000554974 LINC01553A4QN01 128 aa17.48■□□□□ 0.39
XRCC3-210ENST00000554974 SP2Q02086 613 aa17.48■□□□□ 0.39
XRCC3-210ENST00000554974 PGM5Q15124 567 aa17.48■□□□□ 0.39
XRCC3-210ENST00000554974 CELF3Q5SZQ8 465 aaKnown RBP17.48■□□□□ 0.39
XRCC3-210ENST00000554974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.39
XRCC3-210ENST00000554974 STOX1Q6ZVD7 989 aa17.48■□□□□ 0.39
XRCC3-210ENST00000554974 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
XRCC3-210ENST00000554974 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
XRCC3-210ENST00000554974 IKBKEQ14164 716 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 VSIG10LQ86VR7 867 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 FCHSD1Q86WN1 690 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
XRCC3-210ENST00000554974 PIGSQ96S52 555 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 RAD9AQ99638 391 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 EPHX3Q9H6B9 360 aa17.47■□□□□ 0.39
XRCC3-210ENST00000554974 PPFIA4O75335 1185 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 LGR5O75473 907 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 THPOP40225 353 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 ERVK-21P61565 698 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 BCAS3Q9H6U6 928 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 SENP2Q9HC62 589 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
XRCC3-210ENST00000554974 EFCAB14O75071 495 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 CCND2P30279 289 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-210ENST00000554974 GRM4Q14833 912 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 KCNV1Q6PIU1 500 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 DBF4BQ8NFT6 615 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 KHSRPQ92945 711 aaKnown RBP eCLIP17.45■□□□□ 0.38
XRCC3-210ENST00000554974 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 TAF6LQ9Y6J9 622 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
XRCC3-210ENST00000554974 RSPH10B2B2RC85 870 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
XRCC3-210ENST00000554974 CYTH3O43739 400 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 CTSHP09668 335 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 RSPH10BP0C881 870 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 PLA2G5P39877 138 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 ATP6V0A1Q93050 837 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 OSBPL7Q9BZF2 842 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
XRCC3-210ENST00000554974 MAP3K20Q9NYL2 800 aaKnown RBP17.44■□□□□ 0.38
XRCC3-210ENST00000554974 C17orf102A2RUQ5 167 aa17.43■□□□□ 0.38
XRCC3-210ENST00000554974 H3BRB1 525 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms