RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PLAAQ9Y263 795 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 GCOM1H8Y6P7 765 aaPredicted RBP17.21■□□□□ 0.35
SYNE3-203ENST00000554873 PPFIA2O75334 1257 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 TACC1O75410 805 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 MYZAPP0CAP1 466 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 MEA1Q16626 185 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 TCP11X2Q5H9J9 407 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 B4GALNT2Q8NHY0 566 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 RAPGEF5Q92565 580 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 HYOU1Q9Y4L1 999 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 DUSP10Q9Y6W6 482 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 CCND1P24385 295 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
SYNE3-203ENST00000554873 CAPN11Q9UMQ6 739 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 CTCFP49711 727 aaPredicted RBP17.2■□□□□ 0.34
SYNE3-203ENST00000554873 PAK1Q13153 545 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 SPATA21Q7Z572 469 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 GALNT15Q8N3T1 639 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 TEX9Q8N6V9 391 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 NELFBQ8WX92 580 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 PANK4Q9NVE7 773 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 ITGB4P16144 1822 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 STXBP3O00186 592 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 GTPBP6O43824 516 aaPredicted RBP17.2■□□□□ 0.34
SYNE3-203ENST00000554873 SMIM24O75264 130 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 KIF4AO95239 1232 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 GLI1P08151 1106 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 CHRNDQ07001 517 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 BIRC3Q13489 604 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 GNPTABQ3T906 1256 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
SYNE3-203ENST00000554873 MOV10L1Q9BXT6 1211 aaKnown RBP17.2■□□□□ 0.34
SYNE3-203ENST00000554873 EPB41L5Q9HCM4 733 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
SYNE3-203ENST00000554873 ADAMTS3O15072 1205 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 DRD4P21917 467 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 TMOD1P28289 359 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 PIK3AP1Q6ZUJ8 805 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 CCDC197Q8NCU1 140 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 EPAS1Q99814 870 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 OSBPL1AQ9BXW6 950 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 RBM12Q9NTZ6 932 aaKnown RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 BCL9O00512 1426 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 ORC4O43929 436 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 VEGFAP15692 232 aaPredicted RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 HSPA9P38646 679 aaKnown RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 ABL2P42684 1182 aa17.19■□□□□ 0.34
SYNE3-203ENST00000554873 APLFQ8IW19 511 aaPredicted RBP17.19■□□□□ 0.34
SYNE3-203ENST00000554873 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 HEXIM1O94992 359 aaKnown RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 MCM7P33993 719 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 PPP2R2AP63151 447 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ZNF658Q5TYW1 1059 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 TBC1D1Q86TI0 1168 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ZNF526Q8TF50 670 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 KCNMB3Q9NPA1 279 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 A0A1W2PQC6 194 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 GUCY2DQ02846 1103 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 NFRKBQ6P4R8 1299 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ARHGAP22Q7Z5H3 698 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ANKS4BQ8N8V4 417 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 ANKRD27Q96NW4 1050 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 NHEJ1Q9H9Q4 299 aaPredicted RBP17.18■□□□□ 0.34
SYNE3-203ENST00000554873 SMARCAL1Q9NZC9 954 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
SYNE3-203ENST00000554873 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 BACH1O14867 736 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CALM1P0DP23 149 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CALM2P0DP24 149 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CALM3P0DP25 149 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 PRCPP42785 496 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 RUFY4Q6ZNE9 571 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 IRF2BP1Q8IU81 584 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 RASSF10A6NK89 507 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
SYNE3-203ENST00000554873 RPN1P04843 607 aaKnown RBP17.17■□□□□ 0.34
SYNE3-203ENST00000554873 GYG1P46976 350 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CCNG1P51959 295 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 NLRP5P59047 1200 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 FAM81AQ8TBF8 368 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 CAPN6Q9Y6Q1 641 aa17.17■□□□□ 0.34
SYNE3-203ENST00000554873 ESYT3A0FGR9 886 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms