RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PDE6BP35913 854 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ME1P48163 572 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TPM4P67936 248 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 GRM1Q13255 1194 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 MAN2A1Q16706 1144 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 LONRF2Q1L5Z9 754 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 VWA3BQ502W6 1294 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 OTUD7BQ6GQQ9 843 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PRR5LQ6MZQ0 368 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 EMBQ6PCB8 327 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SH3BP5LQ7L8J4 393 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 REPS2Q8NFH8 660 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 AIDAQ96BJ3 306 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 HSD17B14Q9BPX1 270 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CRNKL1Q9BZJ0 848 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 LRRC27Q9C0I9 530 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 COA1Q9GZY4 146 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TSPYL1Q9H0U9 437 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 NAPBQ9H115 298 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ISCUQ9H1K1 167 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TUFT1Q9NNX1 390 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 INCENPQ9NQS7 918 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ZNF112Q9UJU3 913 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 JRKLQ9Y4A0 524 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PNMA6FA0A0J9YX94 578 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ENTPD3O75355 529 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PSMD10O75832 226 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 GUCY2CP25092 1073 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 KIF5BP33176 963 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CORO7P57737 925 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 FGD1P98174 961 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 MAPK7Q13164 816 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 NAA30Q147X3 362 aaPredicted RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 AGBL2Q5U5Z8 902 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ANKRD40Q6AI12 368 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 MFSD5Q6N075 450 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 APOBEC3HQ6NTF7 200 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SPATS2Q86XZ4 545 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ANKRD18AQ8IVF6 992 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CNPY4Q8N129 248 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TXLNBQ8N3L3 684 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CNNM3Q8NE01 707 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 MORC4Q8TE76 937 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 JMJD4Q9H9V9 463 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 EXOC1Q9NV70 894 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SUCLA2Q9P2R7 463 aaPredicted RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TRMT112Q9UI30 125 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SALL4Q9UJQ4 1053 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PPME1Q9Y570 386 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 IGKV6D-21A0A0A0MT36 114 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PDXKO00764 312 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 IFIT3O14879 490 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 GRIN3BO60391 1043 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CAPNS1P04632 268 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 OR52Z1P0C646 297 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 GCKP35557 465 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ATP6V1AP38606 617 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 IGHMBP2P38935 993 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 PTGIRP43119 386 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 RPL34P49207 117 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 NCKAP1LP55160 1127 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 RPS8P62241 208 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 DYNLL1P63167 89 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 GPSM2P81274 684 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TRDNQ13061 729 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 MTF1Q14872 753 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SART3Q15020 963 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 WLSQ5T9L3 541 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 LRRC31Q6UY01 552 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CATIPQ7Z7H3 387 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 RALYLQ86SE5 291 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TXNRD3Q86VQ6 643 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 TRIM22Q8IYM9 498 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 CERS5Q8N5B7 392 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 OR8K1Q8NGG5 319 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SH3RF3Q8TEJ3 882 aaPredicted RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 ERCC4Q92889 916 aaPredicted RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 NAPGQ99747 312 aaPredicted RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 NTPCRQ9BSD7 190 aaKnown RBP3.85□□□□□ -1.79
SEC23A-207ENST00000554615 LRRC4BQ9NT99 713 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SERPINA10Q9UK55 444 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 RABGAP1Q9Y3P9 1069 aa3.85□□□□□ -1.79
SEC23A-207ENST00000554615 SPDYE2BA6NHP3 402 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 MYMKA6NI61 221 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 MAGEB2O15479 319 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 C21orf2O43822 256 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 GABBR2O75899 941 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SPDYE6P0CI01 402 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 GHRP10912 638 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 PTGER2P43116 358 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CDK8P49336 464 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CDK18Q07002 472 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 STK3Q13188 491 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CLUL1Q15846 466 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 KIAA0753Q2KHM9 967 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 ERCC6LQ2NKX8 1250 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SPDYE2Q495Y8 402 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 GALNTL6Q49A17 601 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 EPC2Q52LR7 807 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms