RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 BADQ92934 168 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
LINC00640-201ENST00000554409 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 TMEM39AQ9NV64 488 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
LINC00640-201ENST00000554409 TBX21Q9UL17 535 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 GRIN2DO15399 1336 aa8.68□□□□□ -1.02
LINC00640-201ENST00000554409 GOLGA8AA7E2F4 631 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 GOLGA8BA8MQT2 603 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 MEIS2O14770 477 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 ST18O60284 1047 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 MMP3P08254 477 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 TGFB3P10600 412 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 MYCLP12524 364 aaPredicted RBP8.67□□□□□ -1.02
LINC00640-201ENST00000554409 CPA1P15085 419 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 ITGB8P26012 769 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 CDC27P30260 824 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 EVCP57679 992 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 ARHGAP1Q07960 439 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 FUT2Q10981 343 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 LY6KQ17RY6 165 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 XRRA1Q6P2D8 792 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 Q6ZUG5 572 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 RAB11FIP4Q86YS3 637 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 IL31RAQ8NI17 732 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 SMARCC2Q8TAQ2 1214 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 CUL5Q93034 780 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 INPP4AQ96PE3 977 aaPredicted RBP8.67□□□□□ -1.02
LINC00640-201ENST00000554409 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
LINC00640-201ENST00000554409 TRIOBPQ9H2D6 2365 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
LINC00640-201ENST00000554409 PCDH10Q9P2E7 1040 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 MRVI1Q9Y6F6 885 aa8.67□□□□□ -1.02
LINC00640-201ENST00000554409 TANC1Q9C0D5 1861 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 CCDC196A0A1B0GTZ2 297 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 B4GALT4O60513 344 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 TIMP1P01033 207 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 MYL3P08590 195 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
LINC00640-201ENST00000554409 RAG1P15918 1043 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 CASTP20810 708 aaKnown RBP8.66□□□□□ -1.02
LINC00640-201ENST00000554409 ICAM3P32942 547 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 METAP2P50579 478 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PSMC6P62333 389 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 FGD1P98174 961 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
LINC00640-201ENST00000554409 APOBRQ0VD83 1088 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 LAMC2Q13753 1193 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 GNPTABQ3T906 1256 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PCNX4Q63HM2 1172 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 NFRKBQ6P4R8 1299 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 USP17L6PQ6QN14 398 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 RUFY3Q7L099 469 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PPTC7Q8NI37 304 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 BRF1Q92994 677 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 TM6SF1Q9BZW5 370 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 PSTPIP2Q9H939 334 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 DOCK5Q9H7D0 1870 aa8.66□□□□□ -1.02
LINC00640-201ENST00000554409 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 SOX1O00570 391 aaPredicted RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 UBA1P22314 1058 aaKnown RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 MRPS9P82933 396 aaKnown RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 FPGSQ05932 587 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 DGKDQ16760 1214 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 CELF3Q5SZQ8 465 aaKnown RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 MFSD5Q6N075 450 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 HEATR3Q7Z4Q2 680 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 SESTD1Q86VW0 696 aa8.65□□□□□ -1.02
LINC00640-201ENST00000554409 DHX37Q8IY37 1157 aaKnown RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 ALDH8A1Q9H2A2 487 aaPredicted RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
LINC00640-201ENST00000554409 SPATA31C2B4DYI2 1134 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 STXBP3O00186 592 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 FIBPO43427 364 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
LINC00640-201ENST00000554409 GGPS1O95749 300 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
LINC00640-201ENST00000554409 NAPAP54920 295 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 SP2Q02086 613 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 SEMA3FQ13275 785 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 TOB2Q14106 344 aaPredicted RBP8.64□□□□□ -1.03
LINC00640-201ENST00000554409 SHHQ15465 462 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 PFKFB3Q16875 520 aaPredicted RBP8.64□□□□□ -1.03
LINC00640-201ENST00000554409 TYW1BQ6NUM6 668 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 TMEM199Q8N511 208 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 KAT2BQ92831 832 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
LINC00640-201ENST00000554409 IL17RAQ96F46 866 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms