RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 MYL3P08590 195 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 SUPT20HL2P0C7V6 817 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 TGFB3P10600 412 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 CCND2P30279 289 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 PSMC6P62333 389 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 PTPN11Q06124 597 aaPredicted RBP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 C9orf50Q5SZB4 431 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 FAM109BQ6ICB4 259 aaPredicted RBP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 NFRKBQ6P4R8 1299 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 COPS5Q92905 334 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 DDX41Q9UJV9 622 aaKnown RBP12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 MRVI1Q9Y6F6 885 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 B4GALT4O60513 344 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 RGS20O76081 388 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 RXRAP19793 462 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 HSPA4P34932 840 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 EPHB4P54760 987 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
PTCD2P1-201ENST00000554393 PLCB2Q00722 1185 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 LAMC2Q13753 1193 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 LY6KQ17RY6 165 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 MICU3Q86XE3 530 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 PDCD7Q8N8D1 485 aaKnown RBP12□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPTC7Q8NI37 304 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 AFG1LQ8WV93 481 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 CUL5Q93034 780 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 HIPK3Q9H422 1215 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
PTCD2P1-201ENST00000554393 LAMA2P24043 3122 aaKnown RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 ZBTB43O43298 467 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 DGKDQ16760 1214 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 GNPTABQ3T906 1256 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 FBXL16Q8N461 479 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
PTCD2P1-201ENST00000554393 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 NID2Q14112 1375 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 CNTNAP5Q8WYK1 1306 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 MEIS2O14770 477 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 CSF2RAP15509 400 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 ICAM3P32942 547 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 RTN1Q16799 776 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 CELF3Q5SZQ8 465 aaKnown RBP11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 PCNX4Q63HM2 1172 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPP1R18Q6NYC8 613 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPP1R12CQ9BZL4 782 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 BRPF3Q9ULD4 1205 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 SNX14Q9Y5W7 946 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 SCN5AQ14524 2016 aa11.98□□□□□ -0.49
PTCD2P1-201ENST00000554393 TMEM265A0A087WTH1 108 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 KLF18A0A0U1RQI7 1052 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 FIBPO43427 364 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 PPFIA4O75335 1185 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 GGPS1O95749 300 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 F2P00734 622 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 PFKMP08237 780 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 CYP2C18P33260 490 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 FUT2Q10981 343 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 FAM47CQ5HY64 1035 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 BLOC1S2Q6QNY1 142 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 KAT2BQ92831 832 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 TCEANC2Q96MN5 208 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 AGXT2Q9BYV1 514 aa11.97□□□□□ -0.49
PTCD2P1-201ENST00000554393 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms