RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RIC8AQ9NPQ8 531 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 STXBP3O00186 592 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 GGPS1O95749 300 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 SUPT20HL2P0C7V6 817 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 SCG2P13521 617 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-211ENST00000554310 TOB2Q14106 344 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-211ENST00000554310 UBE2SQ16763 222 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 CELF3Q5SZQ8 465 aaKnown RBP14.98□□□□□ -0.01
SHMT2-211ENST00000554310 MYSM1Q5VVJ2 828 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 TYW1BQ6NUM6 668 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 NLRX1Q86UT6 975 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 SPATA33Q96N06 139 aa14.98□□□□□ -0.01
SHMT2-211ENST00000554310 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-211ENST00000554310 DOCK5Q9H7D0 1870 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 SPATA31C2B4DYI2 1134 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
SHMT2-211ENST00000554310 B4GALT4O60513 344 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 F2P00734 622 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 FOSP01100 380 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-211ENST00000554310 IFNAR1P17181 557 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 PDIA3P30101 505 aaKnown RBP14.97□□□□□ -0.01
SHMT2-211ENST00000554310 AP3B2Q13367 1082 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 NEDD9Q14511 834 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 NBPF20Q3BBV1 942 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 FAM47CQ5HY64 1035 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 MFSD5Q6N075 450 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 CCDC12Q8WUD4 166 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-211ENST00000554310 GPRASP2Q96D09 838 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 ZFP91Q96JP5 570 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-211ENST00000554310 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 HIPK3Q9H422 1215 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 PDRG1Q9NUG6 133 aa14.97□□□□□ -0.01
SHMT2-211ENST00000554310 PPFIA4O75335 1185 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 AKAP17AQ02040 695 aaKnown RBP14.96□□□□□ -0.01
SHMT2-211ENST00000554310 SP2Q02086 613 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 SEMA3FQ13275 785 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 PPIGQ13427 754 aaKnown RBP eCLIP14.96□□□□□ -0.013e-10■□□□□ 10.6
SHMT2-211ENST00000554310 NTRK3Q16288 839 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 HSDL1Q3SXM5 330 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 METTL7BQ6UX53 244 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 SESTD1Q86VW0 696 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 TMEM199Q8N511 208 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 KAT2BQ92831 832 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 IL17RAQ96F46 866 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 ZNF274Q96GC6 653 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-211ENST00000554310 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 NOC4LQ9BVI4 516 aaKnown RBP14.96□□□□□ -0.01
SHMT2-211ENST00000554310 PPP1R12CQ9BZL4 782 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 TRMT13Q9NUP7 481 aaKnown RBP14.96□□□□□ -0.01
SHMT2-211ENST00000554310 PCDHA6Q9UN73 950 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 PCDHA8Q9Y5H6 950 aa14.96□□□□□ -0.01
SHMT2-211ENST00000554310 SMCO2A6NFE2 343 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 SOX1O00570 391 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-211ENST00000554310 ZNF286BP0CG31 522 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 PKN1Q16512 942 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 MCTP2Q6DN12 878 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 TRIM22Q8IYM9 498 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 GIMAP8Q8ND71 665 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-211ENST00000554310 CCDC148Q8NFR7 591 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 PHKBQ93100 1093 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 ANO3Q9BYT9 981 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 NCOA5Q9HCD5 579 aaKnown RBP14.95□□□□□ -0.02
SHMT2-211ENST00000554310 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 UBIAD1Q9Y5Z9 338 aa14.95□□□□□ -0.02
SHMT2-211ENST00000554310 NOP56O00567 594 aaKnown RBP14.94□□□□□ -0.02
SHMT2-211ENST00000554310 CPLX1O14810 134 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 SORBS3O60504 671 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 ITGB5P18084 799 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 CLK2P49760 499 aaKnown RBP14.94□□□□□ -0.02
SHMT2-211ENST00000554310 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
SHMT2-211ENST00000554310 MTMR1Q13613 665 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 SHHQ15465 462 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 C9orf50Q5SZB4 431 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 CPLX2Q6PUV4 134 aaKnown RBP14.94□□□□□ -0.02
SHMT2-211ENST00000554310 SLC26A6Q9BXS9 759 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 ZMYND12Q9H0C1 365 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 C6orf50Q9HD87 102 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 NOD1Q9Y239 953 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 SZT2Q5T011 3432 aa14.94□□□□□ -0.02
SHMT2-211ENST00000554310 HAS3O00219 553 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 MAFGO15525 162 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 CSF2RAP15509 400 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 GNA11P29992 359 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 CYP2C18P33260 490 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 SREBF1P36956 1147 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 PSEN2P49810 448 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 EPHB4P54760 987 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 CHMP4BP1P59074 171 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 MFSD10Q14728 455 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 ANKRD1Q15327 319 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 KIAA0753Q2KHM9 967 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 PSRC1Q6PGN9 363 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-211ENST00000554310 CYFIP1Q7L576 1253 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms