RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CCDC103Q8IW40 242 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 KLHL36Q8N4N3 616 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 ARRDC4Q8NCT1 418 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 BVESQ8NE79 360 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 BACH2Q9BYV9 841 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 L2HGDHQ9H9P8 463 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 METTL5Q9NRN9 209 aaKnown RBP4.24□□□□□ -1.73
SRP54-204ENST00000553923 DTLQ9NZJ0 730 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 DDX41Q9UJV9 622 aaKnown RBP4.24□□□□□ -1.73
SRP54-204ENST00000553923 TCAF1Q9Y4C2 921 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 TIMM13Q9Y5L4 95 aaPredicted RBP4.24□□□□□ -1.73
SRP54-204ENST00000553923 TCRBV5S2A0A599 114 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 NFATC3Q12968 1075 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 GTF2IRD2BQ6EKJ0 949 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 IQCEQ6IPM2 695 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 KIAA1211LQ6NV74 962 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 CEP68Q76N32 757 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 GTF2IRD2Q86UP8 949 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 TRIM59Q8IWR1 403 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 OR6P1Q8NGX9 317 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 TOE1Q96GM8 510 aaKnown RBP4.23□□□□□ -1.73
SRP54-204ENST00000553923 CRBNQ96SW2 442 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 NKX2-4Q9H2Z4 354 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 BTG4Q9NY30 223 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 HSPBP1Q9NZL4 362 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 ADAM29Q9UKF5 820 aa4.23□□□□□ -1.73
SRP54-204ENST00000553923 CNOT4O95628 575 aaKnown RBP4.22□□□□□ -1.73
SRP54-204ENST00000553923 BCL6P41182 706 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 CASP7P55210 303 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 RPL11P62913 178 aaKnown RBP4.22□□□□□ -1.73
SRP54-204ENST00000553923 FOXE3Q13461 319 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 TESK1Q15569 626 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 EMC4Q5J8M3 183 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 MIIPQ5JXC2 388 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 PROSER1Q86XN7 944 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 KREMEN2Q8NCW0 462 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 SHDQ96IW2 340 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 CLIC6Q96NY7 704 aa4.22□□□□□ -1.73
SRP54-204ENST00000553923 HGSO14964 777 aaPredicted RBP4.21□□□□□ -1.74
SRP54-204ENST00000553923 PLSCR1O15162 318 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 CYP7B1O75881 506 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 KLHL18O94889 574 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 ZNF143P52747 638 aaPredicted RBP4.21□□□□□ -1.74
SRP54-204ENST00000553923 PAK2Q13177 524 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 E4F1Q66K89 784 aaPredicted RBP4.21□□□□□ -1.74
SRP54-204ENST00000553923 VHLLQ6RSH7 139 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 NUDT10Q8NFP7 164 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 RASGRP4Q8TDF6 673 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 ZNF503Q96F45 646 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 NUDT11Q96G61 164 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 TRMT2BQ96GJ1 504 aaKnown RBP4.21□□□□□ -1.74
SRP54-204ENST00000553923 TMEM209Q96SK2 561 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 APBA2Q99767 749 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 LGR4Q9BXB1 951 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 JADE2Q9NQC1 790 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 CROTQ9UKG9 612 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 EFR3BQ9Y2G0 817 aa4.21□□□□□ -1.74
SRP54-204ENST00000553923 NPIPB8E9PQR5 432 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 FOXS1O43638 330 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 ZNF16P17020 682 aaPredicted RBP4.2□□□□□ -1.74
SRP54-204ENST00000553923 GTF2A2P52657 109 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 PURAQ00577 322 aaKnown RBP4.2□□□□□ -1.74
SRP54-204ENST00000553923 POMZP3Q6PJE2 187 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 CRACR2BQ8N4Y2 399 aaPredicted RBP4.2□□□□□ -1.74
SRP54-204ENST00000553923 RCBTB1Q8NDN9 531 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 DIO2Q92813 273 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 SEC61A2Q9H9S3 476 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 RBPJLQ9UBG7 517 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 ZDHHC9Q9Y397 364 aa4.2□□□□□ -1.74
SRP54-204ENST00000553923 H7BY64 318 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 SCG5P05408 212 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 TGM1P22735 817 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 FHL2Q14192 279 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 STEAP3Q658P3 488 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 TCTN3Q6NUS6 607 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 TRMT10BQ6PF06 316 aaKnown RBP4.19□□□□□ -1.74
SRP54-204ENST00000553923 TMC5Q6UXY8 1006 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 FAM169BQ8N8A8 192 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.19□□□□□ -1.74
SRP54-204ENST00000553923 TMEM169Q96HH4 297 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 AJUBAQ96IF1 538 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 SPATA32Q96LK8 384 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 WRNIP1Q96S55 665 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 YIPF4Q9BSR8 244 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 CDIP1Q9H305 208 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 BARX1Q9HBU1 254 aaPredicted RBP4.19□□□□□ -1.74
SRP54-204ENST00000553923 FTSJ1Q9UET6 329 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 PCDHB4Q9Y5E5 795 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 SLC4A7Q9Y6M7 1214 aa4.19□□□□□ -1.74
SRP54-204ENST00000553923 TBX1O43435 398 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 CAPNS1P04632 268 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 LCP1P13796 627 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 TGFB2P61812 414 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 CHRNA2Q15822 529 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 ACBD5Q5T8D3 534 aaPredicted RBP4.18□□□□□ -1.74
SRP54-204ENST00000553923 DENND5AQ6IQ26 1287 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 RNF207Q6ZRF8 634 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 BTN2A2Q8WVV5 523 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms