RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MTMR4Q9NYA4 1195 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 POLLQ9UGP5 575 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 JRKLQ9Y4A0 524 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 KIF13BQ9NQT8 1826 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 IGKV6D-41A0A0C4DH26 115 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 PVALEFA0A1B0GWK0 134 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 F8W031 263 aaPredicted RBP7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 MYO1CO00159 1063 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 AKR1B10O60218 316 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 NOL4O94818 638 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 SNHG28P0DPA3 235 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 RFC4P35249 363 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 SLC16A2P36021 539 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 PPP1R2P41236 205 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 GABPAQ06546 454 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 TMEM266Q2M3C6 531 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 SHROOM1Q2M3G4 852 aaPredicted RBP7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 HAUS3Q68CZ6 603 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 LEKR1Q6ZMV7 388 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 FAM196AQ6ZSG2 479 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 SPATA4Q8NEY3 305 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 TRIM58Q8NG06 486 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 AFAP1L1Q8TED9 768 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 MS4A14Q96JA4 679 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 MXD3Q9BW11 206 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 TLR10Q9BXR5 811 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 RRP15Q9Y3B9 282 aaKnown RBP7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 TACC1O75410 805 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 CLK2P49760 499 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 DNA2P51530 1060 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 RASSF7Q02833 373 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 LRRC63Q05C16 580 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ORC2Q13416 577 aaPredicted RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 MAP9Q49MG5 647 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 SND1Q7KZF4 910 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ZNF572Q7Z3I7 529 aaPredicted RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 NELFCDQ8IXH7 590 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ADGRF4Q8IZF3 695 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 MMGT1Q8N4V1 131 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 TANGO6Q9C0B7 1094 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ACBD3Q9H3P7 528 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 RBM12Q9NTZ6 932 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 GGA1Q9UJY5 639 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 NRXN2Q9P2S2 1712 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ABCB11O95342 1321 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 A0A0U1RQG5 324 aaPredicted RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 POTEB3A0JP26 581 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ZSCAN5CA6NGD5 496 aaPredicted RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 POTECB2RU33 542 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 USP17L10C9JJH3 530 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ANKRD65E5RJM6 399 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 E9PMD0 336 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 PJA2O43164 708 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 USO1O60763 962 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 RPS6KA5O75582 802 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 SSBP05455 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 MAGEA1P43355 309 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 VPS72Q15906 364 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 CRY2Q49AN0 593 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ASPRV1Q53RT3 343 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 TDRD12Q587J7 1177 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 KLHDC7AQ5VTJ3 777 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 KRT79Q5XKE5 535 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 POTEBQ6S5H4 581 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 C10orf67Q8IYJ2 551 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 TBC1D16Q8TBP0 767 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 CRACR2AQ9BSW2 395 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 LSM14BQ9BX40 385 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 EHD4Q9H223 541 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 DDX25Q9UHL0 483 aaKnown RBP7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 HYOU1Q9Y4L1 999 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 ANKRD31Q8N7Z5 1873 aa7.67□□□□□ -1.18
LINC-ROR-201ENST00000553704 MCM3P25205 808 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 STAT3P40763 770 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 ZNF543Q08ER8 600 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 KCTD1Q719H9 257 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 MYOCDQ8IZQ8 938 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 CERS5Q8N5B7 392 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 PACSIN1Q9BY11 444 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 RIC8AQ9NPQ8 531 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 LRRC4BQ9NT99 713 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 FAM184BQ9ULE4 1060 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 PACSIN2Q9UNF0 486 aaPredicted RBP7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 PCDHA2Q9Y5H9 948 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 COL4A3BPQ9Y5P4 624 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 GOLGB1Q14789 3259 aaKnown RBP7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 GOLGA6BA6NDN3 693 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 hCG_1984214I3L0E3 225 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 TRAF5O00463 557 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 PLCG2P16885 1265 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 TAL1P17542 331 aaPredicted RBP7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 SHMT1P34896 483 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 GTF2IP78347 998 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 PDIA5Q14554 519 aa7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 KCTD19Q17RG1 926 aaPredicted RBP7.66□□□□□ -1.18
LINC-ROR-201ENST00000553704 CCDC40Q4G0X9 1142 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms