RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
SCFD1-210ENST00000553693 DGKIO75912 1065 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 LCP1P13796 627 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 GRIA2P42262 883 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 SARSP49591 514 aaKnown RBP6.35□□□□□ -1.39
SCFD1-210ENST00000553693 EMC4Q5J8M3 183 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 STEAP3Q658P3 488 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 DENND5AQ6IQ26 1287 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 RSPO2Q6UXX9 243 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-210ENST00000553693 CD300LDQ6UXZ3 194 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 LRRC47Q8N1G4 583 aaKnown RBP6.35□□□□□ -1.39
SCFD1-210ENST00000553693 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 ZNF669Q96BR6 464 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-210ENST00000553693 GORASP1Q9BQQ3 440 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 ADAM7Q9H2U9 754 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 GPR27Q9NS67 375 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 PODXL2Q9NZ53 605 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 PCDHB4Q9Y5E5 795 aa6.35□□□□□ -1.39
SCFD1-210ENST00000553693 MAFKO60675 156 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 FGFR1P11362 822 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 THBS2P35442 1172 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 NKX3-2P78367 333 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
SCFD1-210ENST00000553693 NT5DC1Q5TFE4 455 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 USP53Q70EK8 1073 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 KYQ8NBH2 561 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 PHOSPHO1Q8TCT1 267 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 BORCS6Q96GS4 357 aa6.34□□□□□ -1.39
SCFD1-210ENST00000553693 C11orf84Q9BUA3 381 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-210ENST00000553693 KRIT1O00522 736 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 SUV39H1O43463 412 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 DLX3O60479 287 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 ITGA1P56199 1179 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 NAALADL2Q58DX5 795 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 CYP4F22Q6NT55 531 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCFD1-210ENST00000553693 PHF20Q9BVI0 1012 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
SCFD1-210ENST00000553693 SPATA6Q9NWH7 488 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-210ENST00000553693 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 PRODHO43272 600 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 CELA3BP08861 270 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
SCFD1-210ENST00000553693 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
SCFD1-210ENST00000553693 STAT5AP42229 794 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 ZXDCQ2QGD7 858 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-210ENST00000553693 ZFYVE27Q5T4F4 411 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 FAM26EQ8N5C1 309 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 DCAF4Q8WV16 495 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
SCFD1-210ENST00000553693 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
SCFD1-210ENST00000553693 NOBOXO60393 691 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 TADA3O75528 432 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 IFRD2Q12894 506 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-210ENST00000553693 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 FAM26FQ5R3K3 315 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 UBXN11Q5T124 520 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 ZNF761Q86XN6 746 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-210ENST00000553693 TRIM48Q8IWZ4 208 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 ADAMTS17Q8TE56 1095 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 WRNIP1Q96S55 665 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 PPP1R1BQ9UD71 204 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-210ENST00000553693 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
SCFD1-210ENST00000553693 TCRBV5S2A0A599 114 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 CR1LQ2VPA4 569 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCFD1-210ENST00000553693 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 TANGO6Q9C0B7 1094 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
SCFD1-210ENST00000553693 CYP7B1O75881 506 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 ATP2B1P20020 1258 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 GRK2P25098 689 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 GRK3P35626 688 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 GPR85P60893 370 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 RTP5Q14D33 572 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 LBX2Q6XYB7 198 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 ARRDC4Q8NCT1 418 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 TTLL11Q8NHH1 800 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 OSBP2Q969R2 916 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 CLIC6Q96NY7 704 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 TMEM209Q96SK2 561 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 SLC6A20Q9NP91 592 aa6.29□□□□□ -1.4
SCFD1-210ENST00000553693 CNOT11Q9UKZ1 510 aaKnown RBP6.29□□□□□ -1.4
SCFD1-210ENST00000553693 PDPK1O15530 556 aa6.28□□□□□ -1.4
SCFD1-210ENST00000553693 MSCO60682 206 aa6.28□□□□□ -1.4
SCFD1-210ENST00000553693 SPIRE1Q08AE8 756 aa6.28□□□□□ -1.4
SCFD1-210ENST00000553693 KIAA2012Q0VF49 1180 aa6.28□□□□□ -1.4
SCFD1-210ENST00000553693 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
SCFD1-210ENST00000553693 MTERF2Q49AM1 385 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms