RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CTNNB1P35222 781 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 THPOP40225 353 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 ADAM15Q13444 863 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 KIAA0753Q2KHM9 967 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 FIBCD1Q8N539 461 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 SEPT8Q92599 483 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
PRPF39-204ENST00000553605 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 HAS3O00219 553 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 NMT2O60551 498 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 EYA4O95677 639 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 BMPR1AP36894 532 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
PRPF39-204ENST00000553605 IL17RAQ96F46 866 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
PRPF39-204ENST00000553605 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
PRPF39-204ENST00000553605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
PRPF39-204ENST00000553605 TSPY2A6NKD2 308 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 F2P00734 622 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 NDUFV1P49821 464 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 PPARAQ07869 468 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 HIC1Q14526 733 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 CBX2Q14781 532 aaPredicted RBP16.28■□□□□ 0.2
PRPF39-204ENST00000553605 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
PRPF39-204ENST00000553605 DCHS1Q96JQ0 3298 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 RALGAPA2Q2PPJ7 1873 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 CACNA1HO95180 2353 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 M0R2C6 588 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.2
PRPF39-204ENST00000553605 HMMRO75330 724 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 SERINC5Q86VE9 423 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 RWDD3Q9Y3V2 267 aa16.27■□□□□ 0.2
PRPF39-204ENST00000553605 PLXNA3P51805 1871 aa16.27■□□□□ 0.19
PRPF39-204ENST00000553605 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
PRPF39-204ENST00000553605 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
PRPF39-204ENST00000553605 CSPG5O95196 566 aa16.26■□□□□ 0.19
PRPF39-204ENST00000553605 ID4P47928 161 aa16.26■□□□□ 0.19
PRPF39-204ENST00000553605 NUBP1P53384 320 aa16.26■□□□□ 0.19
PRPF39-204ENST00000553605 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
PRPF39-204ENST00000553605 LAMC2Q13753 1193 aa16.26■□□□□ 0.19
PRPF39-204ENST00000553605 EMID1Q96A84 441 aaPredicted RBP16.26■□□□□ 0.19
PRPF39-204ENST00000553605 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
PRPF39-204ENST00000553605 ATG2AQ2TAZ0 1938 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 MMP1P03956 469 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
PRPF39-204ENST00000553605 LINC00271P0C7V0 271 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 NOVP48745 357 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 STXBP2Q15833 593 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 RGS22Q8NE09 1264 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 PPTC7Q8NI37 304 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 PPP2R3CQ969Q6 453 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 OSBPL7Q9BZF2 842 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 NAPBQ9H115 298 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 CLEC1BQ9P126 229 aa16.25■□□□□ 0.19
PRPF39-204ENST00000553605 WDR19Q8NEZ3 1342 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 GALR2O43603 387 aaPredicted RBP16.24■□□□□ 0.19
PRPF39-204ENST00000553605 KDM4AO75164 1064 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 COASYQ13057 564 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 NSUN6Q8TEA1 469 aaKnown RBP16.24■□□□□ 0.19
PRPF39-204ENST00000553605 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 RPGRIP1Q96KN7 1286 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
PRPF39-204ENST00000553605 PHF7Q9BWX1 381 aaPredicted RBP16.24■□□□□ 0.19
PRPF39-204ENST00000553605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRPF39-204ENST00000553605 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
PRPF39-204ENST00000553605 PPFIA4O75335 1185 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 ICAM3P32942 547 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 NBL1P41271 181 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 CAMK1Q14012 370 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 APBB2Q92870 758 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
PRPF39-204ENST00000553605 IWS1Q96ST2 819 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 USP15Q9Y4E8 981 aaPredicted RBP16.23■□□□□ 0.19
PRPF39-204ENST00000553605 DMDP11532 3685 aa16.23■□□□□ 0.19
PRPF39-204ENST00000553605 C17orf102A2RUQ5 167 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 CTSHP09668 335 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 USH1GQ495M9 461 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 EFHBQ8N7U6 833 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
PRPF39-204ENST00000553605 RIPOR3Q96MK2 946 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms