RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PPTC7Q8NI37 304 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 CDHR1Q96JP9 859 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 TBC1D32Q96NH3 1257 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 TOX2Q96NM4 488 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 SENP7Q9BQF6 1050 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 VPS54Q9P1Q0 977 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 UBIAD1Q9Y5Z9 338 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 MROH7Q68CQ1 1323 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 PPFIA3O75145 1194 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 CTDNEP1O95476 244 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 HOXD8P13378 290 aaPredicted RBP21.11■□□□□ 0.97
CPSF2-202ENST00000553427 CDK7P50613 346 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 PURAQ00577 322 aaKnown RBP21.11■□□□□ 0.97
CPSF2-202ENST00000553427 CELF3Q5SZQ8 465 aaKnown RBP21.11■□□□□ 0.97
CPSF2-202ENST00000553427 GALNT17Q6IS24 598 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 AFG1LQ8WV93 481 aa21.11■□□□□ 0.97
CPSF2-202ENST00000553427 MMP3P08254 477 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 ITGB5P18084 799 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 NEDD9Q14511 834 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 MYSM1Q5VVJ2 828 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
CPSF2-202ENST00000553427 NECAB1Q8N987 351 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 DAGLBQ8NCG7 672 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 CRYGNQ8WXF5 182 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 MTG1Q9BT17 334 aaPredicted RBP21.1■□□□□ 0.97
CPSF2-202ENST00000553427 ATP11BQ9Y2G3 1177 aa21.1■□□□□ 0.97
CPSF2-202ENST00000553427 ARVCFO00192 962 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 MAFGO15525 162 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 GGPS1O95749 300 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 SP2Q02086 613 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 TLE2Q04725 743 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 METTL7BQ6UX53 244 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 WASF1Q92558 559 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 ZFP91Q96JP5 570 aaPredicted RBP21.09■□□□□ 0.97
CPSF2-202ENST00000553427 ZSCAN31Q96LW9 406 aaPredicted RBP21.09■□□□□ 0.97
CPSF2-202ENST00000553427 BACH2Q9BYV9 841 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 SH2B1Q9NRF2 756 aaPredicted RBP21.09■□□□□ 0.97
CPSF2-202ENST00000553427 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 RTEL1Q9NZ71 1219 aa21.09■□□□□ 0.97
CPSF2-202ENST00000553427 SCN10AQ9Y5Y9 1956 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 CYP3A4P08684 503 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 NLRP5P59047 1200 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 ARHGAP4P98171 946 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 DGKDQ16760 1214 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 JAKMIP3Q5VZ66 844 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 NIPA1Q7RTP0 329 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 GIMAP8Q8ND71 665 aaPredicted RBP21.08■□□□□ 0.97
CPSF2-202ENST00000553427 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.97
CPSF2-202ENST00000553427 PGBD1Q96JS3 809 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 ORC3Q9UBD5 711 aaPredicted RBP21.08■□□□□ 0.97
CPSF2-202ENST00000553427 PCDHA4Q9UN74 947 aa21.08■□□□□ 0.97
CPSF2-202ENST00000553427 GRIN2DO15399 1336 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 ADAMTS3O15072 1205 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 MYL3P08590 195 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 XBP1P17861 261 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 ST3GAL1Q11201 340 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 MTMR1Q13613 665 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 ITGA7Q13683 1181 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 NPY5RQ15761 445 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 CEP55Q53EZ4 464 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 VTI1AQ96AJ9 217 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 SPATA33Q96N06 139 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 AIFM3Q96NN9 605 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 MXRA8Q9BRK3 442 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
CPSF2-202ENST00000553427 M0R2N6 131 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 ST18O60284 1047 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 PQBP1O60828 265 aaKnown RBP21.06■□□□□ 0.96
CPSF2-202ENST00000553427 PPFIA4O75335 1185 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 KCNA2P16389 499 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 HSDL1Q3SXM5 330 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 FAM126BQ8IXS8 530 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 MLXIPQ9HAP2 919 aa21.06■□□□□ 0.96
CPSF2-202ENST00000553427 ZMYND8Q9ULU4 1186 aaPredicted RBP21.06■□□□□ 0.96
CPSF2-202ENST00000553427 DCDC2CA8MYV0 355 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 MEIS1O00470 390 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 KIAA0355O15063 1070 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 F2P00734 622 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 CLTBP09497 229 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 FDPSP14324 419 aaKnown RBP21.05■□□□□ 0.96
CPSF2-202ENST00000553427 NFRKBQ6P4R8 1299 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 BLIDQ8IZY5 108 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 LLPHQ9BRT6 129 aaKnown RBP21.05■□□□□ 0.96
CPSF2-202ENST00000553427 PHF20Q9BVI0 1012 aa21.05■□□□□ 0.96
CPSF2-202ENST00000553427 CD4P01730 458 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 CIITAP33076 1130 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 PTPN11Q06124 597 aaPredicted RBP21.04■□□□□ 0.96
CPSF2-202ENST00000553427 FAAP100Q0VG06 881 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 RASGRP4Q8TDF6 673 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 KAT2BQ92831 832 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 PRO3102Q9H379 93 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 KCNH7Q9NS40 1196 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 PRKAG2Q9UGJ0 569 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 TBX21Q9UL17 535 aa21.04■□□□□ 0.96
CPSF2-202ENST00000553427 RANBP2P49792 3224 aaKnown RBP21.03■□□□□ 0.96
CPSF2-202ENST00000553427 TLR3O15455 904 aaKnown RBP21.03■□□□□ 0.96
CPSF2-202ENST00000553427 PSMC6P62333 389 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 CYFIP1Q7L576 1253 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 SESTD1Q86VW0 696 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms