RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 TDHQ8IZJ6 230 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 PGBD1Q96JS3 809 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 TRPV6Q9H1D0 765 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 SMCO2A6NFE2 343 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 SPDYE3A6NKU9 549 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 SPATA31C2B4DYI2 1134 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 SOX1O00570 391 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-217ENST00000553145 ADAMTS3O15072 1205 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 TGFB3P10600 412 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 IFNAR1P17181 557 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 LAMC2Q13753 1193 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 NBPF20Q3BBV1 942 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 HSDL1Q3SXM5 330 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 GNPTABQ3T906 1256 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 XRRA1Q6P2D8 792 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 PPTC7Q8NI37 304 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 KAT2BQ92831 832 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 IL17RAQ96F46 866 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 ZNF274Q96GC6 653 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-217ENST00000553145 ALDH8A1Q9H2A2 487 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-217ENST00000553145 TMEM260Q9NX78 707 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 MYH7BA7E2Y1 1941 aa21.55■■□□□ 1.04
HDAC4-217ENST00000553145 FIBPO43427 364 aa21.54■■□□□ 1.04
HDAC4-217ENST00000553145 STK3Q13188 491 aa21.54■■□□□ 1.04
HDAC4-217ENST00000553145 SLC26A6Q9BXS9 759 aa21.54■■□□□ 1.04
HDAC4-217ENST00000553145 RNF26Q9BY78 433 aaPredicted RBP21.54■■□□□ 1.04
HDAC4-217ENST00000553145 SEZ6LQ9BYH1 1024 aa21.54■■□□□ 1.04
HDAC4-217ENST00000553145 PPP1R12CQ9BZL4 782 aa21.54■■□□□ 1.04
HDAC4-217ENST00000553145 TIMP1P01033 207 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 HOXD8P13378 290 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-217ENST00000553145 ITGB5P18084 799 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 CLK2P49760 499 aaKnown RBP21.53■■□□□ 1.04
HDAC4-217ENST00000553145 EPHB4P54760 987 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 DGKDQ16760 1214 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 SPATA33Q96N06 139 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 TRMT13Q9NUP7 481 aaKnown RBP21.53■■□□□ 1.04
HDAC4-217ENST00000553145 TELO2Q9Y4R8 837 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 UBIAD1Q9Y5Z9 338 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 DOCK5Q9H7D0 1870 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 UMODL1Q5DID0 1318 aa21.53■■□□□ 1.04
HDAC4-217ENST00000553145 ZNF286BP0CG31 522 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 FAM47CQ5HY64 1035 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 C9orf50Q5SZB4 431 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 ANO3Q9BYT9 981 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 MLXIPQ9HAP2 919 aa21.52■■□□□ 1.04
HDAC4-217ENST00000553145 ESYT2A0FGR8 921 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 CYP2C18P33260 490 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 AK2P54819 239 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 FPGSQ05932 587 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 NLRX1Q86UT6 975 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 TEX2Q8IWB9 1127 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 GPRASP2Q96D09 838 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 ZMYND12Q9H0C1 365 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 TPCN1Q9ULQ1 816 aa21.51■■□□□ 1.03
HDAC4-217ENST00000553145 ATP9AO75110 1047 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 SLC34A2O95436 690 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 F2P00734 622 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 FOSP01100 380 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-217ENST00000553145 CYP2C9P11712 490 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 AKAP17AQ02040 695 aaKnown RBP21.5■■□□□ 1.03
HDAC4-217ENST00000553145 AP3B2Q13367 1082 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 SHHQ15465 462 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 MFSD5Q6N075 450 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 METTL7BQ6UX53 244 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 CYFIP1Q7L576 1253 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 LRCH3Q96II8 777 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 NOC4LQ9BVI4 516 aaKnown RBP21.5■■□□□ 1.03
HDAC4-217ENST00000553145 HIPK3Q9H422 1215 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 EHMT1Q9H9B1 1298 aa21.5■■□□□ 1.03
HDAC4-217ENST00000553145 HAS3O00219 553 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
HDAC4-217ENST00000553145 KCNA2P16389 499 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 PSEN2P49810 448 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-217ENST00000553145 SCRN1Q12765 414 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 NEDD9Q14511 834 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 LRIT3Q3SXY7 679 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 JAKMIP3Q5VZ66 844 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 SENP7Q9BQF6 1050 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 C16orf70Q9BSU1 422 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 ALG1Q9BT22 464 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 GLT8D2Q9H1C3 349 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 JADE2Q9NQC1 790 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 VPS54Q9P1Q0 977 aa21.49■■□□□ 1.03
HDAC4-217ENST00000553145 CPLX1O14810 134 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 DTNBO60941 627 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 PPFIA4O75335 1185 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 CSF2RAP15509 400 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 SREBF1P36956 1147 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 SSRP1Q08945 709 aaKnown RBP21.48■■□□□ 1.03
HDAC4-217ENST00000553145 MTMR1Q13613 665 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 MFSD10Q14728 455 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 SESTD1Q86VW0 696 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 CYP2W1Q8TAV3 490 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
HDAC4-217ENST00000553145 CTAGE1Q96RT6 745 aa21.48■■□□□ 1.03
HDAC4-217ENST00000553145 GPR20Q99678 358 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms