RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 TMEM47Q9BQJ4 181 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 CPVLQ9H3G5 476 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 ENC1O14682 589 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 RIMBP2O15034 1052 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 EIF3HO15372 352 aaKnown RBP eCLIP8.13□□□□□ -1.11
BEST3-212ENST00000553096 TACC1O75410 805 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 BAG3O95817 575 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 IDEP14735 1019 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 TNFRSF8P28908 595 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 CASP1P29466 404 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 CDK8P49336 464 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 EPHB4P54760 987 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 ZBED6P86452 979 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 PTGDRQ13258 359 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 NNTQ13423 1086 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 ZNF174Q15697 407 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 FIGNQ5HY92 759 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 SP8Q8IXZ3 490 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 TEX11Q8IYF3 940 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
BEST3-212ENST00000553096 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
BEST3-212ENST00000553096 ATP6V0A2Q9Y487 856 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 A0A1W2PQJ5 194 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 BICDL2A1A5D9 508 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
BEST3-212ENST00000553096 HSF2BPO75031 334 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 TSPY3P0CV98 308 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 TSPY8P0CW00 308 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 TCP1P17987 556 aaKnown RBP8.13□□□□□ -1.11
BEST3-212ENST00000553096 VAV2P52735 878 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 SKOR1P84550 965 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 SPA17Q15506 151 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 PIK3AP1Q6ZUJ8 805 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 MICALCLQ6ZW33 695 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 C4orf32Q8N8J7 132 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 CAPZA3Q96KX2 299 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 SH3GL2Q99962 352 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 ARPC5LQ9BPX5 153 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 BLZF1Q9H2G9 400 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 MAGEF1Q9HAY2 307 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 JADE2Q9NQC1 790 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 EXOC1Q9NV70 894 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 HDAC6Q9UBN7 1215 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 BIN2Q9UBW5 565 aaPredicted RBP8.13□□□□□ -1.11
BEST3-212ENST00000553096 TRIM10Q9UDY6 481 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 FAM169AQ9Y6X4 670 aa8.13□□□□□ -1.11
BEST3-212ENST00000553096 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 AGPSO00116 658 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 GOLGA8HP0CJ92 632 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 STAT6P42226 847 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 PRCPP42785 496 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 CD151P48509 253 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 CCT5P48643 541 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 GTF2IP78347 998 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 GLE1Q53GS7 698 aaKnown RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 DHTKD1Q96HY7 919 aaPredicted RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 ALS2CR12Q96Q35 445 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 SNX12Q9UMY4 172 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 STXBP3O00186 592 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 PES1O00541 588 aaKnown RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 KIAA0754O94854 1291 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 SLURP2P0DP57 97 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 CALML3P27482 149 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 INPP5BP32019 993 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 NOVP48745 357 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 WDR59Q6PJI9 974 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 BCAS4Q8TDM0 211 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 CAVIN3Q969G5 261 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 EYA3Q99504 573 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 RANBP17Q9H2T7 1088 aaKnown RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 CUEDC2Q9H467 287 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 RMI1Q9H9A7 625 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 NHEJ1Q9H9Q4 299 aaPredicted RBP8.12□□□□□ -1.11
BEST3-212ENST00000553096 KCNQ5Q9NR82 932 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 PLIN4Q96Q06 1357 aa8.12□□□□□ -1.11
BEST3-212ENST00000553096 ZEB2O60315 1214 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 LDHCP07864 332 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 NLRP5P59047 1200 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 GNGT1P63211 74 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 SND1Q7KZF4 910 aaKnown RBP eCLIP8.11□□□□□ -1.11
BEST3-212ENST00000553096 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 CEP95Q96GE4 821 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 TACO1Q9BSH4 297 aaKnown RBP8.11□□□□□ -1.11
BEST3-212ENST00000553096 RNF14Q9UBS8 474 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 TSKSQ9UJT2 592 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 HYOU1Q9Y4L1 999 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 PCDHAC2Q9Y5I4 1007 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 F8W031 263 aaPredicted RBP8.11□□□□□ -1.11
BEST3-212ENST00000553096 SRGAP2O75044 1071 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 RHOBTB3O94955 611 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms