RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 WASF1Q92558 559 aa16.13■□□□□ 0.17
PTCH1-226ENST00000553011 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
PTCH1-226ENST00000553011 HTATIP2Q9BUP3 242 aa16.13■□□□□ 0.17
PTCH1-226ENST00000553011 PHF20Q9BVI0 1012 aa16.13■□□□□ 0.17
PTCH1-226ENST00000553011 UBIAD1Q9Y5Z9 338 aa16.13■□□□□ 0.17
PTCH1-226ENST00000553011 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 SPATA31C2B4DYI2 1134 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 M0R2N6 131 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 GGPS1O95749 300 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 ICAM3P32942 547 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 ARHGAP4P98171 946 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 CXCL17Q6UXB2 119 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 FAM177A1Q8N128 213 aaPredicted RBP16.12■□□□□ 0.17
PTCH1-226ENST00000553011 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 CYP2W1Q8TAV3 490 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 DPF3Q92784 378 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
PTCH1-226ENST00000553011 BCAS3Q9H6U6 928 aa16.12■□□□□ 0.17
PTCH1-226ENST00000553011 FIBPO43427 364 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 TGFB3P10600 412 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 XBP1P17861 261 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 MCM2P49736 904 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 SLC39A5Q6ZMH5 540 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
PTCH1-226ENST00000553011 CRYGNQ8WXF5 182 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 GPRASP2Q96D09 838 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 MXRA8Q9BRK3 442 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
PTCH1-226ENST00000553011 A6NJR5 290 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 ZEB2O60315 1214 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 ATP9AO75110 1047 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 MMP3P08254 477 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 MYL3P08590 195 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 CPT1AP50416 773 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 MTMR1Q13613 665 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
PTCH1-226ENST00000553011 MYSM1Q5VVJ2 828 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-226ENST00000553011 STARD7Q9NQZ5 370 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
PTCH1-226ENST00000553011 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-226ENST00000553011 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 EDIL3O43854 480 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 CYP3A4P08684 503 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 ZNF76P36508 570 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
PTCH1-226ENST00000553011 LAMC2Q13753 1193 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 BRDTQ58F21 947 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-226ENST00000553011 KRT40Q6A162 431 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 MLXIPQ9HAP2 919 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 TELO2Q9Y4R8 837 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
PTCH1-226ENST00000553011 KAT6AQ92794 2004 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 MEIS1O00470 390 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 EVI5O60447 810 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 ARP10275 920 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 KCNA2P16389 499 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 RTP1P59025 263 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 PSMC6P62333 389 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
PTCH1-226ENST00000553011 GUCY1B3Q02153 619 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 NEDD9Q14511 834 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 SNX17Q15036 470 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 HSDL1Q3SXM5 330 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 CDHR1Q96JP9 859 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 SPATA33Q96N06 139 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 SENP7Q9BQF6 1050 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 KCNH7Q9NS40 1196 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 ELP1O95163 1332 aa16.08■□□□□ 0.16
PTCH1-226ENST00000553011 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 CABYRO75952 493 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 MMP1P03956 469 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 KRT2P35908 639 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 SP4Q02446 784 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 NR5A1Q13285 461 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 TRIM29Q14134 588 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 METTL7BQ6UX53 244 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 PLA2G4DQ86XP0 818 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
PTCH1-226ENST00000553011 MYH9P35579 1960 aaKnown RBP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 GRIN2DO15399 1336 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms