RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ARMC5Q96C12 935 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 CCDC34Q96HJ3 373 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 STRBPQ96SI9 672 aaKnown RBP6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 MAP3K14Q99558 947 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 FOXP1Q9H334 677 aaPredicted RBP6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 ZNF576Q9H609 170 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 L2HGDHQ9H9P8 463 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 PIH1D3Q9NQM4 214 aaKnown RBP6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 PRDM4Q9UKN5 801 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 SLC12A7Q9Y666 1083 aa6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 COL5A2P05997 1499 aaPredicted RBP6.83□□□□□ -1.32
CHMP4A-210ENST00000552620 NID2Q14112 1375 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 ZNF532Q9HCE3 1301 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 GOLGA6L9A6NEM1 432 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 USP27XA6NNY8 438 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 MINDY4BA8MYZ0 360 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 ZSCAN12O43309 604 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 KIF20AO95235 890 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SERPINC1P01008 464 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TPM1P09493 284 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SLC5A1P13866 664 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 CPB1P15086 417 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PDE6AP16499 860 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PTPRAP18433 802 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 FGFR2P21802 821 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 MARCKSP29966 332 aaPredicted RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 IL6STP40189 918 aaPredicted RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 MAP2K3P46734 347 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PPP2R3AQ06190 1150 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PAK2Q13177 524 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SART3Q15020 963 aaKnown RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 CCDC93Q567U6 631 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 RILPL1Q5EBL4 403 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 AKNAD1Q5T1N1 836 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 ELMSAN1Q6PJG2 1045 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TMED8Q6PL24 325 aaPredicted RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SHC4Q6S5L8 630 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 KRBA2Q6ZNG9 492 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TBC1D10CQ8IV04 446 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 IFNL3Q8IZI9 196 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 CNNM3Q8NE01 707 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PIGBQ92521 554 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 PPP1R13BQ96KQ4 1090 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 HHIPQ96QV1 700 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 NACAP1Q9BZK3 213 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 NAPBQ9H115 298 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TMX1Q9H3N1 280 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 RNF41Q9H4P4 317 aaPredicted RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 GREM2Q9H772 168 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 LY9Q9HBG7 655 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 TRMT1Q9NXH9 659 aaKnown RBP6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 KCNH3Q9ULD8 1083 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SLC6A14Q9UN76 642 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 SAMM50Q9Y512 469 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 RIC1Q4ADV7 1423 aa6.82□□□□□ -1.32
CHMP4A-210ENST00000552620 NWD2Q9ULI1 1742 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 PNPLA7Q6ZV29 1317 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 PHLPP2Q6ZVD8 1323 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ERICH2A1L162 156 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 B4E1Z4 1266 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 BIN1O00499 593 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 C2CD2LO14523 706 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 IFIT3O14879 490 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 IDH1O75874 414 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 DEXIO95424 95 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 CYP19A1P11511 503 aaPredicted RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 LMNB1P20700 586 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 CDC27P30260 824 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 EIF4A3P38919 411 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ADH7P40394 386 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 LIG3P49916 1009 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ETF1P62495 437 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 HLFQ16534 295 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 MFSD6Q6ZSS7 791 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 CREBRFQ8IUR6 639 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 VSTM4Q8IW00 320 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 SPATA5Q8NB90 893 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ENOX1Q8TC92 643 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 STAG1Q8WVM7 1258 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 SLC26A6Q9BXS9 759 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 TMEM39AQ9NV64 488 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ZSWIM5Q9P217 1185 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 TRMT112Q9UI30 125 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms