RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 TRIM50Q86XT4 487 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 ZNF579Q8NAF0 562 aaKnown RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 NSUN6Q8TEA1 469 aaKnown RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 LEO1Q8WVC0 666 aaPredicted RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 PCYT2Q99447 389 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 APBA2Q99767 749 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 MMTAG2Q9BU76 263 aaKnown RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 UNC45AQ9H3U1 944 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 KCNMB3Q9NPA1 279 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 JADE2Q9NQC1 790 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 FBXO2Q9UK22 296 aaPredicted RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 VAV3Q9UKW4 847 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 PTPN22Q9Y2R2 807 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 RBBP6Q7Z6E9 1792 aaKnown RBP8.04□□□□□ -1.12
PFDN5-217ENST00000552548 DOCK5Q9H7D0 1870 aa8.04□□□□□ -1.12
PFDN5-217ENST00000552548 PFASO15067 1338 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CYP3A7-CYP3A51PA0A087WV96 503 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 SPATA31C2B4DYI2 1134 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 STRNO43815 780 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 PGK1P00558 417 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CYBAP13498 195 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 PDCP20941 246 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CYP3A7P24462 503 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 ZNF76P36508 570 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 TECP42680 631 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 NASPP49321 788 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-217ENST00000552548 ACVR2BQ13705 512 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CEP55Q53EZ4 464 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 COL13A1Q5TAT6 717 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-217ENST00000552548 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CYFIP1Q7L576 1253 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 KCNK18Q7Z418 384 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 REM2Q8IYK8 340 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-217ENST00000552548 ABRAQ8N0Z2 381 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 LINC00301Q8NCQ3 95 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CCDC12Q8WUD4 166 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-217ENST00000552548 ERO1AQ96HE7 468 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 INPP4AQ96PE3 977 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-217ENST00000552548 CSRNP2Q9H175 543 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 RGL1Q9NZL6 768 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 PCDHA7Q9UN72 937 aa8.03□□□□□ -1.12
PFDN5-217ENST00000552548 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.12
PFDN5-217ENST00000552548 ZNF236Q9UL36 1845 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 GSTTP1A0A1W2PQM5 241 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 VWA3AA6NCI4 1184 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 NEMFO60524 1076 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 MED24O75448 989 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 PSMD10O75832 226 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 GGPS1O95749 300 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 FOSP01100 380 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 MYCNP04198 464 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 TXNP10599 105 aaKnown RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 LIG1P18858 919 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 ATP4AP20648 1035 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 CASP1P29466 404 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 CNGA1P29973 690 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 CTCFP49711 727 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 PSMC6P62333 389 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 ARHGAP1Q07960 439 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 CTTNQ14247 550 aaKnown RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 STXBP2Q15833 593 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 HSDL1Q3SXM5 330 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 Q4G0T1 1027 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 GALNT17Q6IS24 598 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 B3GNT9Q6UX72 402 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 BRAPQ7Z569 592 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 GRAMD1CQ8IYS0 662 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 RAET1EQ8TD07 263 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 BICD2Q8TD16 824 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 AFG1LQ8WV93 481 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 ERCC4Q92889 916 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 SLC5A5Q92911 643 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 PNMA5Q96PV4 448 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 BRMS1Q9HCU9 246 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 RCOR1Q9UKL0 485 aa8.02□□□□□ -1.13
PFDN5-217ENST00000552548 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
PFDN5-217ENST00000552548 RBM47A0AV96 593 aaKnown RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 IPO5O00410 1097 aaKnown RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 DYNC1LI2O43237 492 aaPredicted RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 EIF3JO75822 258 aaKnown RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 FARP2O94887 1054 aaPredicted RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 STBD1O95210 358 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 OR52Z1P0C646 297 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 ZNF286BP0CG31 522 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 GRK4P32298 578 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 COPB2P35606 906 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 MNX1P50219 401 aaPredicted RBP8.01□□□□□ -1.13
PFDN5-217ENST00000552548 USP11P51784 963 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 SOX10P56693 466 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 NUCB2P80303 420 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 CYP4A11Q02928 519 aa8.01□□□□□ -1.13
PFDN5-217ENST00000552548 MTMR1Q13613 665 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms