RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 CPLX1O14810 134 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 EIF2AK2P19525 551 aaKnown RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 NAPAP54920 295 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 BEX3Q00994 111 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 AKAP17AQ02040 695 aaKnown RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 PDE4DQ08499 809 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 SSRP1Q08945 709 aaKnown RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 RABEP1Q15276 862 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 ARHGEF16Q5VV41 709 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 CPLX2Q6PUV4 134 aaKnown RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 FBXO16Q8IX29 292 aaPredicted RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 NECAB1Q8N987 351 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 CUL5Q93034 780 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
CDK4-211ENST00000552254 PSTPIP2Q9H939 334 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 VTA1Q9NP79 307 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 RIC8AQ9NPQ8 531 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 STARD7Q9NQZ5 370 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 USP34Q70CQ2 3546 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 C5orf42Q9H799 3197 aa10.52□□□□□ -0.73
CDK4-211ENST00000552254 RBM47A0AV96 593 aaKnown RBP10.51□□□□□ -0.73
CDK4-211ENST00000552254 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 CTAGE5O15320 804 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 CTDNEP1O95476 244 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 ASGR1P07306 291 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 NR3C2P08235 984 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 CLTBP09497 229 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 TNFAIP2Q03169 654 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 PGM5Q15124 567 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 SKIV2LQ15477 1246 aaKnown RBP10.51□□□□□ -0.73
CDK4-211ENST00000552254 STXBP2Q15833 593 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 UBE2SQ16763 222 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 IQSEC1Q6DN90 963 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 COL26A1Q96A83 441 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 VTI1AQ96AJ9 217 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 PDCD2LQ9BRP1 358 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 LIMCH1Q9UPQ0 1083 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 FRMPD4Q14CM0 1322 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
CDK4-211ENST00000552254 UNC79Q9P2D8 2635 aa10.51□□□□□ -0.73
CDK4-211ENST00000552254 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 DTNBO60941 627 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 CDKL5O76039 1030 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 DEXIO95424 95 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 MYCLP12524 364 aaPredicted RBP10.5□□□□□ -0.73
CDK4-211ENST00000552254 SMPD1P17405 629 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 ADCY7P51828 1080 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 EPHB4P54760 987 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 GJA9P57773 515 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 FAAP100Q0VG06 881 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 AAK1Q2M2I8 961 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 TMEM31Q5JXX7 168 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 VSIG10LQ86VR7 867 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 TSEN34Q9BSV6 310 aaKnown RBP10.5□□□□□ -0.73
CDK4-211ENST00000552254 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
CDK4-211ENST00000552254 UPF3AQ9H1J1 476 aaKnown RBP10.5□□□□□ -0.73
CDK4-211ENST00000552254 KMT2BQ9UMN6 2715 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 ANKRD11Q6UB99 2663 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 ADAMTS3O15072 1205 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 CST5P28325 142 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 CCND2P30279 289 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 ST3GAL1Q11201 340 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 DUSP28Q4G0W2 176 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 CXCL17Q6UXB2 119 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 SEPT14Q6ZU15 432 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 TLK2Q86UE8 772 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 ZSCAN31Q96LW9 406 aaPredicted RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 GLT1D1Q96MS3 346 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 AIFM3Q96NN9 605 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 LRFN3Q9BTN0 628 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 WDR11Q9BZH6 1224 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 GLT8D2Q9H1C3 349 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 SPC25Q9HBM1 224 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 SH3GLB2Q9NR46 395 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 TMEM39AQ9NV64 488 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 PCDHA6Q9UN73 950 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
CDK4-211ENST00000552254 PCDHA8Q9Y5H6 950 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 STK36Q9NRP7 1315 aa10.49□□□□□ -0.73
CDK4-211ENST00000552254 SPDYE3A6NKU9 549 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms