RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 WDR59Q6PJI9 974 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CHP1Q99653 195 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 TRIM9Q9C026 710 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 HAUS4Q9H6D7 363 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 ZNF646O15015 1829 aaPredicted RBP9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CAPN15O75808 1086 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 PLCG1P19174 1290 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CCNE1P24864 410 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 NONOQ15233 471 aaKnown RBP eCLIP9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 BEND6Q5SZJ8 279 aaPredicted RBP9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CABP7Q86V35 215 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CDCA5Q96FF9 252 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 CLMNQ96JQ2 1002 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 ZNF341Q9BYN7 854 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
RAB3IP-215ENST00000551641 PLIN4Q96Q06 1357 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 BICDL2A1A5D9 508 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 hCG_1984214I3L0E3 225 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 TUBBP07437 444 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 GNA11P29992 359 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 FIGNQ5HY92 759 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 USP50Q70EL3 339 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 ZNF713Q8N859 430 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 P2RX5Q93086 422 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 NUP58Q9BVL2 599 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 ELP3Q9H9T3 547 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 ZBTB21Q9ULJ3 1066 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 ZHX2Q9Y6X8 837 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 DICER1Q9UPY3 1922 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 PSME4Q14997 1843 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 A0A1W2PRG0 241 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 RASSF10A6NK89 507 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 HERVK_113P62684 666 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 CDK17Q00537 523 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 TRAPPC11Q7Z392 1133 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 PNKPQ96T60 521 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 EXOC1Q9NV70 894 aa9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 MAGEC2Q9UBF1 373 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 PUF60Q9UHX1 559 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-215ENST00000551641 A0A1W2PQJ5 194 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 SMCO2A6NFE2 343 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 TTLL1O95922 423 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 NAPAP54920 295 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 SPP2Q13103 211 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 RASSF8Q8NHQ8 419 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 ERGIC2Q96RQ1 377 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 TUBGCP2Q9BSJ2 902 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 PICK1Q9NRD5 415 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 MYO6Q9UM54 1294 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CCNT1O60563 726 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CELF2O95319 508 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CTAGE8P0CG41 777 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 NF2P35240 595 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CAP2P40123 477 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 STK4Q13043 487 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 MIIPQ5JXC2 388 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 PAPD7Q5XG87 772 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 PNMA8AQ86V59 439 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 FAM114A1Q8IWE2 563 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CCDC170Q8IYT3 715 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CSGALNACT2Q8N6G5 542 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CCDC47Q96A33 483 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 IQCDQ96DY2 449 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 MTMR9Q96QG7 549 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 ZSWIM4Q9H7M6 989 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
RAB3IP-215ENST00000551641 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 B4DLN1 442 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 SLC1A4P43007 532 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 KRT83P78385 493 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 ZBED6P86452 979 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 AMPD3Q01432 767 aa9.01□□□□□ -0.97
RAB3IP-215ENST00000551641 PDE4DQ08499 809 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms