RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-208ENST00000551338 N4BP3O15049 544 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 ICAM1P05362 532 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 PLA2G4BP0C869 781 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
RAB5C-208ENST00000551338 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
RAB5C-208ENST00000551338 COASYQ13057 564 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 DGKZQ13574 1117 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 CEP135Q66GS9 1140 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-208ENST00000551338 GUF1Q8N442 669 aaKnown RBP12.85□□□□□ -0.35
RAB5C-208ENST00000551338 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 TRPM4Q8TD43 1214 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 LPAR1Q92633 364 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
RAB5C-208ENST00000551338 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ARHGAP6O43182 974 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 MFAP3LO75121 409 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 GYPCP04921 128 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 SPATA31C1P0DKV0 1188 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 IDEP14735 1019 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 CYP11B2P19099 503 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 FECHP22830 423 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ZNF76P36508 570 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 HSD17B4P51659 736 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 UBXN2AP68543 259 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 GHRHRQ02643 423 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 RBL2Q08999 1139 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 PSMD2Q13200 908 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 CENPPQ6IPU0 288 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 GPBP1Q86WP2 473 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
RAB5C-208ENST00000551338 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 GLIS3Q8NEA6 775 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
RAB5C-208ENST00000551338 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
RAB5C-208ENST00000551338 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-208ENST00000551338 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-208ENST00000551338 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
RAB5C-208ENST00000551338 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 EML1O00423 815 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
RAB5C-208ENST00000551338 STX10O60499 249 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
RAB5C-208ENST00000551338 RPA1P27694 616 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
RAB5C-208ENST00000551338 PPFIBP1Q86W92 1011 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 SLC5A5Q92911 643 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 PANX2Q96RD6 677 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 COL20A1Q9P218 1284 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 STK24Q9Y6E0 443 aa12.83□□□□□ -0.36
RAB5C-208ENST00000551338 NFIBO00712 420 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 CCP110O43303 1012 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 PSMD10O75832 226 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 VCAM1P19320 739 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 CASP14P31944 242 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 GTF2F1P35269 517 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB5C-208ENST00000551338 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB5C-208ENST00000551338 MTMR2Q13614 643 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 TRIM14Q14142 442 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 MB21D1Q8N884 522 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
RAB5C-208ENST00000551338 CCDC51Q96ER9 411 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
RAB5C-208ENST00000551338 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 SLC38A10Q9HBR0 1119 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
RAB5C-208ENST00000551338 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 PCDHA2Q9Y5H9 948 aa12.82□□□□□ -0.36
RAB5C-208ENST00000551338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms