RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 SGMS1Q86VZ5 419 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 MICU3Q86XE3 530 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 SRBD1Q8N5C6 995 aaKnown RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 MAFAQ8NHW3 353 aaPredicted RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 AFAP1L1Q8TED9 768 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 PPP1R13LQ8WUF5 828 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 MYLIPQ8WY64 445 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 KAT2BQ92831 832 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 PBX4Q9BYU1 374 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 PSTPIP2Q9H939 334 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 RBM28Q9NW13 759 aaKnown RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 CXXC1Q9P0U4 656 aaPredicted RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 FRMPD4Q14CM0 1322 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 PARNO95453 639 aaKnown RBP23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 F2P00734 622 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 IQCF3P0C7M6 154 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 ZNF286BP0CG31 522 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 DHX32Q7L7V1 743 aaKnown RBP23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 NLRX1Q86UT6 975 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 GTF2IRD1Q9UHL9 959 aa23.37■■□□□ 1.33
SLC48A1-208ENST00000551301 GRXCR1A8MXD5 290 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 FIBPO43427 364 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 SORBS3O60504 671 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 TSGA10IPQ3SY00 556 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 PCNX4Q63HM2 1172 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 GDF6Q6KF10 455 aaPredicted RBP23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 USP17L6PQ6QN14 398 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 TMTC3Q6ZXV5 915 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 CMTR1Q8N1G2 835 aaKnown RBP23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 CCDC82Q8N4S0 544 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 INPP4AQ96PE3 977 aaPredicted RBP23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 EHMT1Q9H9B1 1298 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 SLC28A3Q9HAS3 691 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 HDAC6Q9UBN7 1215 aa23.36■■□□□ 1.33
SLC48A1-208ENST00000551301 SPDYE3A6NKU9 549 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 NEFLP07196 543 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 HOXD8P13378 290 aaPredicted RBP23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 ATP2A2P16615 1042 aaKnown RBP23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 ICAM3P32942 547 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 HSDL1Q3SXM5 330 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 RAB11FIP4Q86YS3 637 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 GIMAP8Q8ND71 665 aaPredicted RBP23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 ZFP91Q96JP5 570 aaPredicted RBP23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 CDHR1Q96JP9 859 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 GAS2L1Q99501 681 aaPredicted RBP23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 RTEL1Q9NZ71 1219 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 CUL9Q8IWT3 2517 aa23.35■■□□□ 1.33
SLC48A1-208ENST00000551301 SPATA31C2B4DYI2 1134 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 ZBTB43O43298 467 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 SELPP16109 830 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 PBX2P40425 430 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 MRPS9P82933 396 aaKnown RBP23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 SP2Q02086 613 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 GRIN2CQ14957 1233 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 APOA5Q6Q788 366 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 METTL7BQ6UX53 244 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 HEATR3Q7Z4Q2 680 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 USP26Q9BXU7 913 aa23.34■■□□□ 1.33
SLC48A1-208ENST00000551301 HAS3O00219 553 aa23.33■■□□□ 1.33
SLC48A1-208ENST00000551301 MEIS2O14770 477 aa23.33■■□□□ 1.33
SLC48A1-208ENST00000551301 PTK7Q13308 1070 aa23.33■■□□□ 1.33
SLC48A1-208ENST00000551301 RTN1Q16799 776 aa23.33■■□□□ 1.33
SLC48A1-208ENST00000551301 PCDHA11Q9Y5I1 949 aa23.33■■□□□ 1.33
SLC48A1-208ENST00000551301 H3BRB1 525 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 DLL1O00548 723 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 LRRC8DQ7L1W4 858 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 CYFIP1Q7L576 1253 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 TEX2Q8IWB9 1127 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 SLC9A7Q96T83 725 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 SENP7Q9BQF6 1050 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 TUT1Q9H6E5 874 aaKnown RBP23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 ZNF215Q9UL58 517 aaPredicted RBP23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 NAP1L2Q9ULW6 460 aaPredicted RBP23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 MYO9BQ13459 2157 aa23.32■■□□□ 1.32
SLC48A1-208ENST00000551301 hCG_1642624A0A1W2PR95 340 aa23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 BAIAP3O94812 1187 aa23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 KCNJ6P48051 423 aa23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 EXOSC10Q01780 885 aaKnown RBP23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 PHOSPHO2Q8TCD6 241 aa23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 GPKOWQ92917 476 aaPredicted RBP eCLIP23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 NKX2-4Q9H2Z4 354 aa23.31■■□□□ 1.32
SLC48A1-208ENST00000551301 KIF28PB7ZC32 967 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 REC8O95072 547 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 GNAT1P11488 350 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 RBL2Q08999 1139 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 COL9A3Q14050 684 aaPredicted RBP23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 RASEFQ8IZ41 740 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 GPRASP2Q96D09 838 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 TCEANC2Q96MN5 208 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 C16orf70Q9BSU1 422 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 TRIP12Q14669 1992 aaPredicted RBP23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 TANC1Q9C0D5 1861 aa23.3■■□□□ 1.32
SLC48A1-208ENST00000551301 A0A0C4DFX4 3053 aa23.29■■□□□ 1.32
SLC48A1-208ENST00000551301 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
SLC48A1-208ENST00000551301 CCDC196A0A1B0GTZ2 297 aa23.29■■□□□ 1.32
SLC48A1-208ENST00000551301 C17orf102A2RUQ5 167 aa23.29■■□□□ 1.32
SLC48A1-208ENST00000551301 GOLGA8AA7E2F4 631 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms