RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CDC27P30260 824 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CCND2P30279 289 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 HSPA4P34932 840 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 TRAF1Q13077 416 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CELF3Q5SZQ8 465 aaKnown RBP15.04■□□□□ -0
NPAS3-209ENST00000551008 GDF6Q6KF10 455 aaPredicted RBP15.04■□□□□ -0
NPAS3-209ENST00000551008 SESTD1Q86VW0 696 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 TMEM199Q8N511 208 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 PPTC7Q8NI37 304 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
NPAS3-209ENST00000551008 FAM161BQ96MY7 647 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 PRUNE2Q8WUY3 3088 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 GRXCR1A8MXD5 290 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 GGPS1O95749 300 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 ICAM3P32942 547 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 UBE2SQ16763 222 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 FAM47CQ5HY64 1035 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 WWC2Q6AWC2 1192 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 SIP14410 1827 aa15.03■□□□□ -0
NPAS3-209ENST00000551008 NID2Q14112 1375 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 ADAMTS3O15072 1205 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
NPAS3-209ENST00000551008 LAMC2Q13753 1193 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 GPNMBQ14956 572 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 BRDTQ58F21 947 aaPredicted RBP15.02■□□□□ -0
NPAS3-209ENST00000551008 DHX37Q8IY37 1157 aaKnown RBP15.02■□□□□ -0
NPAS3-209ENST00000551008 HERVK_113Q902F9 699 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 WNT8BQ93098 351 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 SEC63Q9UGP8 760 aaKnown RBP15.02■□□□□ -0
NPAS3-209ENST00000551008 STXBP5LQ9Y2K9 1186 aa15.02■□□□□ -0
NPAS3-209ENST00000551008 KAT6AQ92794 2004 aa15.02□□□□□ -0.01
NPAS3-209ENST00000551008 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
NPAS3-209ENST00000551008 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 ZBTB43O43298 467 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 TGFB3P10600 412 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 CASTP20810 708 aaKnown RBP15.01□□□□□ -0.01
NPAS3-209ENST00000551008 PBX2P40425 430 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 PSEN2P49810 448 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 KRT32Q14532 448 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 DGKDQ16760 1214 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 RTN1Q16799 776 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 PCNX4Q63HM2 1172 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
NPAS3-209ENST00000551008 AGXT2Q9BYV1 514 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 SEMA6BQ9H3T3 888 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 HDAC6Q9UBN7 1215 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 GTF2IRD1Q9UHL9 959 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 WDR81Q562E7 1941 aa15.01□□□□□ -0.01
NPAS3-209ENST00000551008 SUPT20HL2P0C7V6 817 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 DNAJB2P25686 324 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 HOXC8P31273 242 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 ZNF200P98182 395 aaPredicted RBP15□□□□□ -0.01
NPAS3-209ENST00000551008 RBL2Q08999 1139 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 APOBRQ0VD83 1088 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 MFSD10Q14728 455 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 TRIM71Q2Q1W2 868 aaKnown RBP15□□□□□ -0.01
NPAS3-209ENST00000551008 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 TRAF7Q6Q0C0 670 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 SMARCC2Q8TAQ2 1214 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 SPATA33Q96N06 139 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 JAKMIP1Q96N16 626 aaKnown RBP15□□□□□ -0.01
NPAS3-209ENST00000551008 PSTPIP2Q9H939 334 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
NPAS3-209ENST00000551008 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.99□□□□□ -0.01
NPAS3-209ENST00000551008 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.99□□□□□ -0.01
NPAS3-209ENST00000551008 GOLGA8AA7E2F4 631 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 GOLGA8BA8MQT2 603 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 STXBP3O00186 592 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 FIBPO43427 364 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 STAM2O75886 525 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 IQCF3P0C7M6 154 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 ITGB5P18084 799 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 RPS6KB1P23443 525 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
NPAS3-209ENST00000551008 RCAN1P53805 252 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 CHMP4BP1P59074 171 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 PTGISQ16647 500 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 KIAA0753Q2KHM9 967 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 TCTN1Q2MV58 587 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 Q6ZUG5 572 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 HEATR3Q7Z4Q2 680 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 FBXL16Q8N461 479 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 CDX2Q99626 313 aaPredicted RBP14.99□□□□□ -0.01
NPAS3-209ENST00000551008 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 PBX4Q9BYU1 374 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
NPAS3-209ENST00000551008 UBIAD1Q9Y5Z9 338 aa14.99□□□□□ -0.01
NPAS3-209ENST00000551008 A0A0C4DFX4 3053 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 ATP9AO75110 1047 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 PPFIA4O75335 1185 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 FGBP02675 491 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 LGALS2P05162 132 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 KCNA2P16389 499 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms