RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 FRMPD3Q5JV73 1810 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 SPATA31C2B4DYI2 1134 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 KBTBD13C9JR72 458 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 GH1P01241 217 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 CYP3A4P08684 503 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 ITGB5P18084 799 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 IRX5P78411 483 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 NONOQ15233 471 aaKnown RBP eCLIP18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 CEP55Q53EZ4 464 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 GNASQ5JWF2 1037 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 FBXO18Q8NFZ0 1043 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 TBCKQ8TEA7 893 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 CRYGNQ8WXF5 182 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 PAWRQ96IZ0 340 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 JADE2Q9NQC1 790 aa18.49■□□□□ 0.55
CHMP1A-209ENST00000550872 MYADML2A6NDP7 307 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 BTBD18B2RXH4 712 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 DNM1LO00429 736 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 MNX1P50219 401 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 BEX3Q00994 111 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 NR5A1Q13285 461 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 MTMR1Q13613 665 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 CYP2W1Q8TAV3 490 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 DIS3LQ8TF46 1054 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 CDHR1Q96JP9 859 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 MYH7BA7E2Y1 1941 aa18.48■□□□□ 0.55
CHMP1A-209ENST00000550872 MEIS1O00470 390 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 CTAGE5O15320 804 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 MAFGO15525 162 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 SORBS3O60504 671 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 GGPS1O95749 300 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 UBA1P22314 1058 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 CST5P28325 142 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 USP11P51784 963 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 NKX3-2P78367 333 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 SP2Q02086 613 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 NEDD9Q14511 834 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 KCNA10Q16322 511 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 INF2Q27J81 1249 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 PIK3AP1Q6ZUJ8 805 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 NECAB2Q7Z6G3 386 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 PLA2G4DQ86XP0 818 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 PCSK9Q8NBP7 692 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 TSEN34Q9BSV6 310 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
CHMP1A-209ENST00000550872 FAM86B1E9PN63 330 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 ZEB2O60315 1214 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 FAM86B2P0C5J1 330 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 ARHGAP1Q07960 439 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 LAMC2Q13753 1193 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 GNL2Q13823 731 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 BRDTQ58F21 947 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 CELF3Q5SZQ8 465 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 INTS4Q96HW7 963 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 SENP7Q9BQF6 1050 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 C11orf49Q9H6J7 331 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 KCNH7Q9NS40 1196 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 PKD2L1Q9P0L9 805 aa18.46■□□□□ 0.55
CHMP1A-209ENST00000550872 EDIL3O43854 480 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 ATP9AO75110 1047 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 ARP10275 920 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 CIITAP33076 1130 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 CPT1AP50416 773 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 PRR16Q569H4 304 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 EARS2Q5JPH6 523 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 MYSM1Q5VVJ2 828 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 CCSAPQ6IQ19 270 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 UBE2Q1Q7Z7E8 422 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 AFG1LQ8WV93 481 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 FERMT2Q96AC1 680 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 SENP6Q9GZR1 1112 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 PHF24Q9UPV7 400 aa18.45■□□□□ 0.54
CHMP1A-209ENST00000550872 IGLV3-22A0A075B6J6 115 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 FAM205CA6NFA0 338 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 MOXD2PA6NHM9 499 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 A6NJR5 290 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 H3BQV1 296 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 ASGR1P07306 291 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 COL6A1P12109 1028 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 ACLYP53396 1101 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 LETM2Q2VYF4 491 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 NEK8Q86SG6 692 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 GIMAP8Q8ND71 665 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 EMID1Q96A84 441 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 SPATA33Q96N06 139 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 FOXP1Q9H334 677 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
CHMP1A-209ENST00000550872 MYL3P08590 195 aa18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 KCNA2P16389 499 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms