RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 NIFKQ9BYG3 293 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 LRRC2Q9BYS8 371 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 C11orf49Q9H6J7 331 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 TOMM22Q9NS69 142 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 SAP30BPQ9UHR5 308 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 HCN2Q9UL51 889 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 ROBO3Q96MS0 1386 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 NAV1Q8NEY1 1877 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 ERICH2A1L162 156 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 FAM196BA6NMK8 535 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 TMEM229AB2RXF0 380 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 SH2B2O14492 632 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 IFIT3O14879 490 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 RANBP6O60518 1105 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 XRCC5P13010 732 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 CYP2B6P20813 491 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 PDIA3P30101 505 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 HOXA7P31268 230 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 RGS2P41220 211 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 CDK8P49336 464 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 APOBRQ0VD83 1088 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 SEMA3FQ13275 785 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 GRIN2CQ14957 1233 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 MAP7D1Q3KQU3 841 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 RRP12Q5JTH9 1297 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 CCDC84Q86UT8 332 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 METTL16Q86W50 562 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 IQCA1Q86XH1 822 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 ZNF444Q8N0Y2 327 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 ANKS1AQ92625 1134 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 DYNLL2Q96FJ2 89 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 BTBD6Q96KE9 485 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 FEZ1Q99689 392 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 EHD4Q9H223 541 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 LY9Q9HBG7 655 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 MKNK2Q9HBH9 465 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 CABP5Q9NP86 173 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 TCP11L1Q9NUJ3 509 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 MORF4L1Q9UBU8 362 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 PCDHGC4Q9Y5F7 938 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 USP3Q9Y6I4 520 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 IVNS1ABPQ9Y6Y0 642 aa7.17□□□□□ -1.26
DEPDC4-209ENST00000550587 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 PIK3CDO00329 1044 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 DHX16O60231 1041 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 PRDM1O75626 825 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 LARGE1O95461 756 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 EPXP11678 715 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 PDIA4P13667 645 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 RASA1P20936 1047 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 RCAN1P53805 252 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 USP14P54578 494 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 HERVK_113P62684 666 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 TFAP4Q01664 338 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 GABPAQ06546 454 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 SEC23AQ15436 765 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 TMEM67Q5HYA8 995 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 XP32Q5T750 250 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 WDR78Q5VTH9 848 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 MFSD14CQ5VZR4 134 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 FIGNL1Q6PIW4 674 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 STK11IPQ8N1F8 1099 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 NECAB1Q8N987 351 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 GTF3C6Q969F1 213 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 P2RX7Q99572 595 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 LBHD1Q9BQE6 289 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 LLPHQ9BRT6 129 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 UBAC1Q9BSL1 405 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 CHMP5Q9NZZ3 219 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 SWAP70Q9UH65 585 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 SERPINB13Q9UIV8 391 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 GJD2Q9UKL4 321 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 BRPF3Q9ULD4 1205 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 CEP290O15078 2479 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 CUL9Q8IWT3 2517 aa7.16□□□□□ -1.26
DEPDC4-209ENST00000550587 DDX60LQ5H9U9 1706 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 HTTP42858 3142 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 TRIOBPQ9H2D6 2365 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 KLF18A0A0U1RQI7 1052 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 DCDC2BA2VCK2 349 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 CCDC69A6NI79 296 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 TSPY2A6NKD2 308 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms