RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KREMEN2Q8NCW0 462 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 CHST13Q8NET6 341 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 SH3RF3Q8TEJ3 882 aaPredicted RBP4.48□□□□□ -1.69
CCNT1-203ENST00000550457 CPLX3Q8WVH0 158 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 ZSWIM3Q96MP5 696 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 CD248Q9HCU0 757 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 BAZ1BQ9UIG0 1483 aaKnown RBP4.48□□□□□ -1.69
CCNT1-203ENST00000550457 CEP164Q9UPV0 1460 aa4.48□□□□□ -1.69
CCNT1-203ENST00000550457 BAZ1AQ9NRL2 1556 aaPredicted RBP4.48□□□□□ -1.69
CCNT1-203ENST00000550457 VPS8Q8N3P4 1428 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 SUV39H1O43463 412 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 IL13P35225 146 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 NKX3-2P78367 333 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 RBM10P98175 930 aaKnown RBP4.47□□□□□ -1.69
CCNT1-203ENST00000550457 SF1Q15637 639 aaKnown RBP4.47□□□□□ -1.69
CCNT1-203ENST00000550457 PRAMEF18Q5VWM3 479 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 IQCEQ6IPM2 695 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 DENND5AQ6IQ26 1287 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 RCBTB1Q8NDN9 531 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 DNERQ8NFT8 737 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 DIO2Q92813 273 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 PPP1R14AQ96A00 147 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 TRMT2BQ96GJ1 504 aaKnown RBP4.47□□□□□ -1.69
CCNT1-203ENST00000550457 SORCS2Q96PQ0 1159 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 SRRDQ9UH36 339 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 CDK11AQ9UQ88 783 aaPredicted RBP4.47□□□□□ -1.69
CCNT1-203ENST00000550457 ZNF652Q9Y2D9 606 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 TSC22D4Q9Y3Q8 395 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 CUX2O14529 1486 aa4.47□□□□□ -1.69
CCNT1-203ENST00000550457 DHX57Q6P158 1386 aaKnown RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 TCRBV5S2A0A599 114 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 LRG1P02750 347 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 SLPIP03973 132 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 CYP1A1P04798 512 aaPredicted RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 ITGAVP06756 1048 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 LCP1P13796 627 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 TACR2P21452 398 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 ECI1P42126 302 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 KRTAP1-1Q07627 177 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 NCAPHQ15003 741 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 PRSS53Q2L4Q9 553 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 E4F1Q66K89 784 aaPredicted RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 PKN3Q6P5Z2 889 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 TEPPQ6URK8 271 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 IGDCC4Q8TDY8 1250 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 ZCCHC14Q8WYQ9 949 aaKnown RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 KISS1RQ969F8 398 aaPredicted RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 ANAPC16Q96DE5 110 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 TMEM169Q96HH4 297 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 WWC2-AS2Q96NR7 200 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 PTPN18Q99952 460 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 KLC2Q9H0B6 622 aa4.46□□□□□ -1.7
CCNT1-203ENST00000550457 NGRNQ9NPE2 291 aaKnown RBP4.46□□□□□ -1.7
CCNT1-203ENST00000550457 NACADO15069 1562 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 MROH2BQ7Z745 1585 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 B2RBV5 119 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 HGSO14964 777 aaPredicted RBP4.45□□□□□ -1.7
CCNT1-203ENST00000550457 MEFVO15553 781 aaPredicted RBP4.45□□□□□ -1.7
CCNT1-203ENST00000550457 TADA3O75528 432 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 SCG5P05408 212 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 NAT2P11245 290 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 EPHB4P54760 987 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 KCNAB2Q13303 367 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 SURF1Q15526 300 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 TESK1Q15569 626 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 TMCO4Q5TGY1 634 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 CRIP3Q6Q6R5 217 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 TOE1Q96GM8 510 aaKnown RBP4.45□□□□□ -1.7
CCNT1-203ENST00000550457 YIPF4Q9BSR8 244 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 TMEM168Q9H0V1 697 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 L2HGDHQ9H9P8 463 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 DTLQ9NZJ0 730 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 RBPJLQ9UBG7 517 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 KIF21BO75037 1637 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 SCRIBQ14160 1630 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 CLIP1P30622 1438 aa4.45□□□□□ -1.7
CCNT1-203ENST00000550457 CCDC88BA6NC98 1476 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 NPEPPSL1A6NEC2 478 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 SNRPB2P08579 225 aaKnown RBP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 COL6A1P12109 1028 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 HOXC12P31275 282 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 ACVRL1P37023 503 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 GTF2A2P52657 109 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PPP2CBP62714 309 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PPP2CAP67775 309 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 R3HDM1Q15032 1099 aaKnown RBP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 EMC4Q5J8M3 183 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 ACBD5Q5T8D3 534 aaPredicted RBP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 STEAP3Q658P3 488 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 C6orf15Q6UXA7 325 aaPredicted RBP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PLEKHH3Q7Z736 793 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 KBTBD2Q8IY47 623 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 C1orf159Q96HA4 380 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 CLIC6Q96NY7 704 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 CDIP1Q9H305 208 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 ACBD3Q9H3P7 528 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms