RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 COBLO75128 1261 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 GH2P01242 217 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 SSBP05455 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
TMEM116-209ENST00000550020 PLA2G4BP0C869 781 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 CTAGE8P0CG41 777 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 FCER1AP12319 257 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 GAP43P17677 238 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 RPA1P27694 616 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 GABPB1Q06547 395 aaPredicted RBP9.92□□□□□ -0.82
TMEM116-209ENST00000550020 EHHADHQ08426 723 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 KIF5AQ12840 1032 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 COASYQ13057 564 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 BRD3Q15059 726 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 FBXO38Q6PIJ6 1188 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 CTAGE6Q86UF2 777 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 GPBP1Q86WP2 473 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 ZFPM1Q8IX07 1006 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 CTAGE4Q8IX94 777 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 UBE2Q2Q8WVN8 375 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 SLF1Q9BQI6 1058 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 SEMA6BQ9H3T3 888 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 GINM1Q9NU53 330 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 KIAA1024Q9UPX6 916 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 TMX2Q9Y320 296 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 MRPL11Q9Y3B7 192 aaKnown RBP9.92□□□□□ -0.82
TMEM116-209ENST00000550020 COL4A3BPQ9Y5P4 624 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 MYH8P13535 1937 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L15C9J2P7 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L13C9JLJ4 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L11C9JVI0 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L18D6R9N7 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L22D6RA61 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L17D6RBQ6 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L19D6RCP7 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L20D6RJB6 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 MEIS2O14770 477 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CETN3O15182 167 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 TBCAO75347 108 aaKnown RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 RPL13P26373 211 aaKnown RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 EPS15P42566 896 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CACNB3P54284 484 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 MARSP56192 900 aaKnown RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L24Q0WX57 530 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 GPS2Q13227 327 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 PRR16Q569H4 304 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 HERC4Q5GLZ8 1057 aaPredicted RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 MIIPQ5JXC2 388 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 TEX35Q5T0J7 233 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CCDC122Q5T0U0 273 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CCDC70Q6NSX1 233 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 USP17L6PQ6QN14 398 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 SH3BP5LQ7L8J4 393 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CACNA2D4Q7Z3S7 1137 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 FAM83AQ86UY5 434 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 SAMD3Q8N6K7 520 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 CRYGNQ8WXF5 182 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 SYN2Q92777 582 aaPredicted RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 POLR3CQ9BUI4 534 aaPredicted RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 TANGO6Q9C0B7 1094 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 DEF6Q9H4E7 631 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 ARFGAP3Q9NP61 516 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
TMEM116-209ENST00000550020 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 V9GYY5 206 aaPredicted RBP9.91□□□□□ -0.82
TMEM116-209ENST00000550020 GCOM1H8Y6P7 765 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 TRAF5O00463 557 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 TACC1O75410 805 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 GDF11O95390 407 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 POLR2MP0CAP2 368 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 CHRNA5P30532 468 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ARHGAP25P42331 645 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SETQ01105 290 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 TNIP1Q15025 636 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 KRT26Q7Z3Y9 468 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SIAH1Q8IUQ4 282 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 FMNL3Q8IVF7 1028 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SLC35F6Q8N357 371 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SYT2Q8N9I0 419 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 MTMR14Q8NCE2 650 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ACRBPQ8NEB7 543 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 NEK9Q8TD19 979 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 DNAJC19Q96DA6 116 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms