RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 H2AFVQ71UI9 128 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 FAM186BQ8IYM0 893 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 EXOC7Q9UPT5 735 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 TUBB2AQ13885 445 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 TUBB2BQ9BVA1 445 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 LRRIQ4A6NIV6 560 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 VPS41P49754 854 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 CLCN6P51797 869 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 EARS2Q5JPH6 523 aaKnown RBP16.47■□□□□ 0.23
CUX1-214ENST00000550008 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 WDR24Q96S15 920 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 POLLQ9UGP5 575 aa16.47■□□□□ 0.23
CUX1-214ENST00000550008 ACTN2P35609 894 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 CDC42EP5Q6NZY7 148 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 PANX2Q96RD6 677 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 PARD6BQ9BYG5 372 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 HYOU1Q9Y4L1 999 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 NFIAQ12857 509 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 SFR1Q86XK3 245 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 SMAP1Q8IYB5 467 aaPredicted RBP16.46■□□□□ 0.23
CUX1-214ENST00000550008 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
CUX1-214ENST00000550008 PDE11AQ9HCR9 933 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 CNTNAP4Q9C0A0 1308 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 GFPT2O94808 682 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 STK4Q13043 487 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 NCAPG2Q86XI2 1143 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 UHMK1Q8TAS1 419 aaKnown RBP16.46■□□□□ 0.23
CUX1-214ENST00000550008 DPH5Q9H2P9 285 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
CUX1-214ENST00000550008 GOLGA6L7A0A1B0GV03 622 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 GOLGA8IPA6NC78 632 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 GOLGA8JA6NMD2 632 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 UNC13DQ70J99 1090 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 METTL13Q8N6R0 699 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 CCDC26Q8TAB7 109 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 DCCP43146 1447 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 GOLGA6CA6NDK9 693 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
CUX1-214ENST00000550008 GOLGA6DP0CG33 693 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 TRPC3Q13507 836 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 KRT26Q7Z3Y9 468 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 CHP1Q99653 195 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 GOLGA6AQ9NYA3 693 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 ANKFY1Q9P2R3 1169 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 PHLPP2Q6ZVD8 1323 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 KIF11P52732 1056 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 POMGNT1Q8WZA1 660 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 RABGGTAQ92696 567 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 KIFAP3Q92845 792 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 hCG_1984214I3L0E3 225 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
CUX1-214ENST00000550008 PDHBP11177 359 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 GYS1P13807 737 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
CUX1-214ENST00000550008 SEC23AQ15436 765 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 ZNF713Q8N859 430 aaPredicted RBP16.45■□□□□ 0.22
CUX1-214ENST00000550008 DEPTORQ8TB45 409 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 VTI1AQ96AJ9 217 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 TRIM9Q9C026 710 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
CUX1-214ENST00000550008 RGL1Q9NZL6 768 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 CEP83Q9Y592 693 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 CSADQ9Y600 493 aa16.45■□□□□ 0.22
CUX1-214ENST00000550008 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 HGSO14964 777 aaPredicted RBP16.44■□□□□ 0.22
CUX1-214ENST00000550008 MYL1P05976 194 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 LONRF2Q1L5Z9 754 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
CUX1-214ENST00000550008 CAMTA1Q9Y6Y1 1673 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 DCAF15Q66K64 600 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 RAVER2Q9HCJ3 691 aaKnown RBP16.44■□□□□ 0.22
CUX1-214ENST00000550008 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 STXBP3O00186 592 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
CUX1-214ENST00000550008 BANK1Q8NDB2 785 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms