RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PPP1R37O75864 691 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 GRM4Q14833 912 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 CAVIN4Q5BKX8 364 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 CACNA2D4Q7Z3S7 1137 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 PALMO75781 387 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 USP17L8P0C7I0 530 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 KLRK1P26718 216 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
HDAC7-228ENST00000548938 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
HDAC7-228ENST00000548938 COBLL1Q53SF7 1204 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 MREGQ8N565 214 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
HDAC7-228ENST00000548938 CABS1Q96KC9 395 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 CPVLQ9H3G5 476 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 AMPD3Q01432 767 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 PPARDQ03181 441 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 DYMQ7RTS9 669 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
HDAC7-228ENST00000548938 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 TSKSQ9UJT2 592 aa15.15■□□□□ 0.02
HDAC7-228ENST00000548938 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 MYMKA6NI61 221 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 PRDX5P30044 214 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 GSCP56915 257 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-228ENST00000548938 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 LRRC55Q6ZSA7 311 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 SPATS2Q86XZ4 545 aaKnown RBP15.14■□□□□ 0.01
HDAC7-228ENST00000548938 GLIS3Q8NEA6 775 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 DYNLL2Q96FJ2 89 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 SSU72P8A0A1W2PR75 194 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 TLR2O60603 784 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 GOLGA8HP0CJ92 632 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 RNF187Q5TA31 235 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-228ENST00000548938 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-228ENST00000548938 NLRP14Q86W24 1093 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 CD302Q8IX05 232 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 CCT8L2Q96SF2 557 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
HDAC7-228ENST00000548938 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 MDH1P40925 334 aaKnown RBP15.13■□□□□ 0.01
HDAC7-228ENST00000548938 KCNMA1Q12791 1236 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 SF3B3Q15393 1217 aaKnown RBP15.13■□□□□ 0.01
HDAC7-228ENST00000548938 SBK1Q52WX2 424 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 MAATS1Q7Z4T9 603 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 DGKHQ86XP1 1220 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-228ENST00000548938 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 RNF14Q9UBS8 474 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 PLAAQ9Y263 795 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 RBAK-RBAKDNI3L0D1 243 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 RAD51CO43502 376 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 KLRC1P26715 233 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 HPDP32754 393 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-228ENST00000548938 ITGB3BPQ13352 177 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-228ENST00000548938 SLC10A5Q5PT55 438 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 CEP85LQ5SZL2 805 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 EMC10Q5UCC4 262 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 MICALCLQ6ZW33 695 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 SV2BQ7L1I2 683 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 CALML4Q96GE6 196 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 JAG2Q9Y219 1238 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 TAF1P21675 1872 aa15.13■□□□□ 0.01
HDAC7-228ENST00000548938 ABCB11O95342 1321 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 MAP2K2P36507 400 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 GNAQP50148 359 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 NAPAP54920 295 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 GRB10Q13322 594 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 NONOQ15233 471 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC7-228ENST00000548938 LRRC41Q15345 812 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 E7EVH7 732 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 EHHADHQ08426 723 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 IFT88Q13099 833 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 YTHDF3Q7Z739 585 aaKnown RBP15.12■□□□□ 0.01
HDAC7-228ENST00000548938 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 GUF1Q8N442 669 aaKnown RBP15.12■□□□□ 0.01
HDAC7-228ENST00000548938 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 CENPHQ9H3R5 247 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 LAMB2P55268 1798 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 LY75O60449 1722 aa15.12■□□□□ 0.01
HDAC7-228ENST00000548938 HMGB1P1B2RPK0 211 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-228ENST00000548938 TXKP42681 527 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 SLC9C1Q4G0N8 1177 aa15.11■□□□□ 0.01
HDAC7-228ENST00000548938 KRT25Q7Z3Z0 450 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms