RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GOLGA8KD6RF30 607 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 EIF3HO15372 352 aaKnown RBP eCLIP15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 PJA2O43164 708 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 HSF2BPO75031 334 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 PALMO75781 387 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 NOL4O94818 638 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 BTDP43251 543 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 LRRC63Q05C16 580 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 PDCLQ13371 301 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 STK17AQ9UEE5 414 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 TRAF5O00463 557 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 SSBP05455 408 aaKnown RBP eCLIP15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 LIG3P49916 1009 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 GUCY2FP51841 1108 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 EIF6P56537 245 aaKnown RBP15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 POLR2FP61218 127 aaKnown RBP15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 GUCY2DQ02846 1103 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 EMBQ6PCB8 327 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 CLEC10AQ8IUN9 316 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 MICALL1Q8N3F8 863 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 EPB41L5Q9HCM4 733 aa15.62■□□□□ 0.09
RAPGEF3-218ENST00000548919 OPA1O60313 960 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 TNNI2P48788 182 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 TMEM266Q2M3C6 531 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 NELFCDQ8IXH7 590 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 EFCAB13Q8IY85 973 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 EFCC1Q9HA90 598 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM169AQ9Y6X4 670 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 COL5A3P25940 1745 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 EBAG9O00559 213 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 HEXIM1O94992 359 aaKnown RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 FGFR1OPO95684 399 aaKnown RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 PPARDQ03181 441 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 UBE2SQ16763 222 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 CFAP221Q4G0U5 840 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 TADA2BQ86TJ2 420 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 NEDD1Q8NHV4 660 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 LSM14BQ9BX40 385 aaKnown RBP15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 PACSIN1Q9BY11 444 aa15.61■□□□□ 0.09
RAPGEF3-218ENST00000548919 DDX60LQ5H9U9 1706 aaKnown RBP15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 KLRC1P26715 233 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 COASYQ13057 564 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 KRT79Q5XKE5 535 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 C16orf86Q6ZW13 317 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 AMIGO3Q86WK7 504 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 MYOCDQ8IZQ8 938 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 TBC1D5Q92609 795 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 CAVIN3Q969G5 261 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 TSG101Q99816 390 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 PPP4CP60510 307 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 GSTO1P78417 241 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 EHHADHQ08426 723 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 PTPROQ16827 1216 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 SFMBT2Q5VUG0 894 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 DNAAF5Q86Y56 855 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 KRT12Q99456 494 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 COL4A3BPQ9Y5P4 624 aa15.6■□□□□ 0.09
RAPGEF3-218ENST00000548919 NPHP3-ACAD11A0A0J9YXS1 232 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 SSU72P8A0A1W2PR75 194 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ZNF233A6NK53 670 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ADCY7P51828 1080 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 NNTQ13423 1086 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ALS2CLQ60I27 953 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 GPCPD1Q9NPB8 672 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ZEB2O60315 1214 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 RAPGEF1Q13905 1077 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 IFT20Q8IY31 132 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 RUBCNQ92622 972 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ADAMTS1Q9UHI8 967 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 ABCB11O95342 1321 aa15.59■□□□□ 0.09
RAPGEF3-218ENST00000548919 A0A087X0T9 212 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 SHTN1A0MZ66 631 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM228BP0C875 321 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 EPB41P11171 864 aaKnown RBP15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 PDHBP11177 359 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 GBP6Q6ZN66 633 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM133AQ8N9E0 248 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 GOLPH3Q9H4A6 298 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 ZNF287Q9HBT7 754 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 PANK4Q9NVE7 773 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 CEP72Q9P209 647 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 NARFQ9UHQ1 456 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms