RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SEMA3FQ13275 785 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 LAMC2Q13753 1193 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 NTRK3Q16288 839 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 PKN1Q16512 942 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 CELF3Q5SZQ8 465 aaKnown RBP18.09■□□□□ 0.49
DDX54-205ENST00000548786 TDHQ8IZJ6 230 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
DDX54-205ENST00000548786 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 TBX21Q9UL17 535 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 DOCK5Q9H7D0 1870 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 LAMA3Q16787 3333 aa18.09■□□□□ 0.49
DDX54-205ENST00000548786 hCG_1984214I3L0E3 225 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 CPLX1O14810 134 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 ADAMTS3O15072 1205 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
DDX54-205ENST00000548786 EVCP57679 992 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 DGKDQ16760 1214 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 HSDL1Q3SXM5 330 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 MYSM1Q5VVJ2 828 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 KCNV1Q6PIU1 500 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 CYFIP1Q7L576 1253 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 ZNF713Q8N859 430 aaPredicted RBP18.08■□□□□ 0.48
DDX54-205ENST00000548786 PPTC7Q8NI37 304 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 ALDH8A1Q9H2A2 487 aaPredicted RBP18.08■□□□□ 0.48
DDX54-205ENST00000548786 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.48
DDX54-205ENST00000548786 UMODL1Q5DID0 1318 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 SPATA31C2B4DYI2 1134 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 SOX1O00570 391 aaPredicted RBP18.07■□□□□ 0.48
DDX54-205ENST00000548786 FIBPO43427 364 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 KPNA6O60684 536 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 STAM2O75886 525 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 CD4P01730 458 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 CYP2C9P11712 490 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 IFNAR1P17181 557 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 CYP2C18P33260 490 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 EPHB4P54760 987 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 ANAPC15P60006 121 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 KAT2BQ92831 832 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 EMID1Q96A84 441 aaPredicted RBP18.07■□□□□ 0.48
DDX54-205ENST00000548786 ZNF274Q96GC6 653 aaPredicted RBP18.07■□□□□ 0.48
DDX54-205ENST00000548786 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 ANO3Q9BYT9 981 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 EHMT1Q9H9B1 1298 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 VPS54Q9P1Q0 977 aa18.07■□□□□ 0.48
DDX54-205ENST00000548786 SCN10AQ9Y5Y9 1956 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 LAMA2P24043 3122 aaKnown RBP18.06■□□□□ 0.48
DDX54-205ENST00000548786 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
DDX54-205ENST00000548786 TIMP1P01033 207 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 ITGB5P18084 799 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 AK2P54819 239 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 FPGSQ05932 587 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 XRRA1Q6P2D8 792 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 NLRX1Q86UT6 975 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 LRCH3Q96II8 777 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 RNF26Q9BY78 433 aaPredicted RBP18.06■□□□□ 0.48
DDX54-205ENST00000548786 HIPK3Q9H422 1215 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
DDX54-205ENST00000548786 A0A1W2PPC1 479 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 TGFB3P10600 412 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 ICAM3P32942 547 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 PSEN2P49810 448 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 CCL23P55773 120 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
DDX54-205ENST00000548786 MTMR1Q13613 665 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 SHHQ15465 462 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 TRIM22Q8IYM9 498 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 CYP2W1Q8TAV3 490 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 RASGRP4Q8TDF6 673 aa18.05■□□□□ 0.48
DDX54-205ENST00000548786 SLKQ9H2G2 1235 aaPredicted RBP18.05■□□□□ 0.48
DDX54-205ENST00000548786 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 ATP9AO75110 1047 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 CSF2RAP15509 400 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 NEK4P51957 841 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 SCRN1Q12765 414 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 NEDD9Q14511 834 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 MFSD10Q14728 455 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 METTL7BQ6UX53 244 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
DDX54-205ENST00000548786 GPRASP2Q96D09 838 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 AIFM3Q96NN9 605 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 NOC4LQ9BVI4 516 aaKnown RBP18.04■□□□□ 0.48
DDX54-205ENST00000548786 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 NOD1Q9Y239 953 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 UBIAD1Q9Y5Z9 338 aa18.04■□□□□ 0.48
DDX54-205ENST00000548786 RBAK-RBAKDNI3L0D1 243 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 FOSP01100 380 aaPredicted RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 ACRP10323 421 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 CLK2P49760 499 aaKnown RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 KIAA0753Q2KHM9 967 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 GDF6Q6KF10 455 aaPredicted RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 MFSD5Q6N075 450 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 NFRKBQ6P4R8 1299 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms