RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 NCAPH2Q6IBW4 605 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 ERMNQ8TAM6 284 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 EMILIN3Q9NT22 766 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 SPATA31C1P0DKV0 1188 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 TNNT1P13805 278 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 IDEP14735 1019 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 RPA1P27694 616 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 PSMD2Q13200 908 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 MTMR2Q13614 643 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 CENPPQ6IPU0 288 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 CSGALNACT2Q8N6G5 542 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 EHMT1Q9H9B1 1298 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 STK24Q9Y6E0 443 aa23.36■■□□□ 1.33
RITA1-201ENST00000548278 UTRNP46939 3433 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 VCAM1P19320 739 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 HSD17B4P51659 736 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 SCYL3Q8IZE3 742 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 HOOK2Q96ED9 719 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 SEMA6BQ9H3T3 888 aa23.35■■□□□ 1.33
RITA1-201ENST00000548278 POTEFA5A3E0 1075 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 TPM2P07951 284 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 POTEIP0CG38 1075 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 LMNB1P20700 586 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 RBL2Q08999 1139 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 PRAMEF18Q5VWM3 479 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 POTEGQ6S5H5 508 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 POTEEQ6S8J3 1075 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 ARHGAP27Q6ZUM4 889 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 CREBRFQ8IUR6 639 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 GPC2Q8N158 579 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 GUF1Q8N442 669 aaKnown RBP23.34■■□□□ 1.33
RITA1-201ENST00000548278 CLEC4DQ8WXI8 215 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 BAG1Q99933 345 aaPredicted RBP23.34■■□□□ 1.33
RITA1-201ENST00000548278 SLC38A10Q9HBR0 1119 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 AKR1B15C9JRZ8 316 aaPredicted RBP23.34■■□□□ 1.33
RITA1-201ENST00000548278 SSBP05455 408 aaKnown RBP eCLIP23.34■■□□□ 1.33
RITA1-201ENST00000548278 SLC12A3P55017 1021 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 UBXN2AP68543 259 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 COASYQ13057 564 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 CEP135Q66GS9 1140 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 TANGO6Q9C0B7 1094 aa23.34■■□□□ 1.33
RITA1-201ENST00000548278 BMP2KQ9NSY1 1161 aaPredicted RBP23.34■■□□□ 1.33
RITA1-201ENST00000548278 USP14P54578 494 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 SPP2Q13103 211 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 PPFIBP1Q86W92 1011 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 GPBP1Q86WP2 473 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 SLC5A5Q92911 643 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 PPP1R13BQ96KQ4 1090 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 PANK4Q9NVE7 773 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 PPP1R9AQ9ULJ8 1098 aa23.33■■□□□ 1.33
RITA1-201ENST00000548278 ARHGAP6O43182 974 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 STX10O60499 249 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 FLOT1O75955 427 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 CYP11B2P19099 503 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 GHRHRQ02643 423 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 CEP55Q53EZ4 464 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 ZKSCAN4Q969J2 545 aaPredicted RBP23.32■■□□□ 1.32
RITA1-201ENST00000548278 PANX2Q96RD6 677 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 WRNIP1Q96S55 665 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 MAGEC2Q9UBF1 373 aaPredicted RBP23.32■■□□□ 1.32
RITA1-201ENST00000548278 SBF1O95248 1867 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 EML1O00423 815 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 NFIBO00712 420 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
RITA1-201ENST00000548278 BACE1P56817 501 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 PSMC6P62333 389 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 PTPN14Q15678 1187 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 POLR3CQ9BUI4 534 aaPredicted RBP23.32■■□□□ 1.32
RITA1-201ENST00000548278 GGA3Q9NZ52 723 aa23.32■■□□□ 1.32
RITA1-201ENST00000548278 LGALS16A8MUM7 142 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 PSMD10O75832 226 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 GYPCP04921 128 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 PTPRAP18433 802 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 EPS15P42566 896 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 ARSHQ5FYA8 562 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 OTOP1Q7RTM1 612 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 ZNF507Q8TCN5 953 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 RPAP3Q9H6T3 665 aaPredicted RBP23.31■■□□□ 1.32
RITA1-201ENST00000548278 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
RITA1-201ENST00000548278 PARP14Q460N5 1801 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 RPTORQ8N122 1335 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 UQCRHLA0A096LP55 91 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 MEIS1O00470 390 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 UQCRHP07919 91 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 UBXN1Q04323 297 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 CPXCR1Q8N123 301 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 GLIS3Q8NEA6 775 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 MYRIPQ8NFW9 859 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 EIF2AK1Q9BQI3 630 aaKnown RBP23.31■■□□□ 1.32
RITA1-201ENST00000548278 PICK1Q9NRD5 415 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 COL20A1Q9P218 1284 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 FZD1Q9UP38 647 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 DNM3Q9UQ16 869 aa23.31■■□□□ 1.32
RITA1-201ENST00000548278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.31■■□□□ 1.32
RITA1-201ENST00000548278 NPHP3-ACAD11A0A0J9YXS1 232 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 PPP2R5CQ13362 524 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 FAM114A1Q8IWE2 563 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 CCDC65Q8IXS2 484 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 ZNF280CQ8ND82 737 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 EEF2KMTQ96G04 330 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms