RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 ANKRD35Q8N283 1001 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 SHCBP1Q8NEM2 672 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 DNERQ8NFT8 737 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
RAB5B-204ENST00000548068 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
RAB5B-204ENST00000548068 RIT2Q99578 217 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 MMTAG2Q9BU76 263 aaKnown RBP13.9□□□□□ -0.18
RAB5B-204ENST00000548068 TEKT3Q9BXF9 490 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 DNAJC25Q9H1X3 360 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 UBIAD1Q9Y5Z9 338 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
RAB5B-204ENST00000548068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
RAB5B-204ENST00000548068 GAS7O60861 476 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 XRCC6P12956 609 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB5B-204ENST00000548068 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
RAB5B-204ENST00000548068 DPYDQ12882 1025 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 TMEM119Q4V9L6 283 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 NLRX1Q86UT6 975 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 NCAPG2Q86XI2 1143 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
RAB5B-204ENST00000548068 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 IWS1Q96ST2 819 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 BPIFA3Q9BQP9 254 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 MROH8Q9H579 483 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 KBTBD4Q9NVX7 518 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 ADD3Q9UEY8 706 aaKnown RBP13.89□□□□□ -0.19
RAB5B-204ENST00000548068 LCTP09848 1927 aa13.89□□□□□ -0.19
RAB5B-204ENST00000548068 GOLGA6L19H0YKK7 550 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 PDHXO00330 501 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 IPO5O00410 1097 aaKnown RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 BIN1O00499 593 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 FOXN1O15353 648 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MAFGO15525 162 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 CNMDO75829 334 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 PSMD10O75832 226 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 NR3C2P08235 984 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MYCLP12524 364 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MUTP22033 750 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 TPM4P67936 248 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 SPIRE1Q08AE8 756 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 GRB10Q13322 594 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MTMR1Q13613 665 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 CST9Q5W186 159 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 SV2BQ7L1I2 683 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 GRAMD1CQ8IYS0 662 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MLKLQ8NB16 471 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 NEK9Q8TD19 979 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 LARP4BQ92615 738 aaKnown RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 ERCC4Q92889 916 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 PARK7Q99497 189 aaKnown RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MOV10L1Q9BXT6 1211 aaKnown RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 GPBP1L1Q9HC44 474 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-204ENST00000548068 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 TBC1D22BQ9NU19 505 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
RAB5B-204ENST00000548068 BECN2A8MW95 431 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 ITGB5P18084 799 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 RPA1P27694 616 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 ERVK-24P63145 666 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
RAB5B-204ENST00000548068 MORC3Q14149 939 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-204ENST00000548068 VSIG10LQ86VR7 867 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 SMC1BQ8NDV3 1235 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 RAD54LQ92698 747 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 POLR3CQ9BUI4 534 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-204ENST00000548068 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 ZCCHC17Q9NP64 241 aaKnown RBP13.87□□□□□ -0.19
RAB5B-204ENST00000548068 KCNH7Q9NS40 1196 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
RAB5B-204ENST00000548068 LOC102724159A0A0B4J2E5 919 aa13.86□□□□□ -0.19
RAB5B-204ENST00000548068 MANSC4A6NHS7 340 aaPredicted RBP13.86□□□□□ -0.19
RAB5B-204ENST00000548068 SMTNL1A8MU46 457 aa13.86□□□□□ -0.19
RAB5B-204ENST00000548068 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
RAB5B-204ENST00000548068 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
RAB5B-204ENST00000548068 ARP10275 920 aa13.86□□□□□ -0.19
RAB5B-204ENST00000548068 ERCC3P19447 782 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms