RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SP2Q02086 613 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 SSRP1Q08945 709 aaKnown RBP13.54□□□□□ -0.24
RAB5C-204ENST00000547517 FAAP100Q0VG06 881 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 LAMC2Q13753 1193 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 HABP4Q5JVS0 413 aaKnown RBP13.54□□□□□ -0.24
RAB5C-204ENST00000547517 CELF3Q5SZQ8 465 aaKnown RBP13.54□□□□□ -0.24
RAB5C-204ENST00000547517 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 FAM126BQ8IXS8 530 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 CCDC148Q8NFR7 591 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-204ENST00000547517 SPATA33Q96N06 139 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 TOX2Q96NM4 488 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-204ENST00000547517 PRO3102Q9H379 93 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 C6orf50Q9HD87 102 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 TMEM39AQ9NV64 488 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 SPATA31C2B4DYI2 1134 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 TLR3O15455 904 aaKnown RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 KPNA6O60684 536 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 PFKFB2O60825 505 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 LARGE1O95461 756 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 TGFB3P10600 412 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 ICAM3P32942 547 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 DGKDQ16760 1214 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 NLRX1Q86UT6 975 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
RAB5C-204ENST00000547517 ZMYND12Q9H0C1 365 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
RAB5C-204ENST00000547517 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.24
RAB5C-204ENST00000547517 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
RAB5C-204ENST00000547517 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 ADAMTS3O15072 1205 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 B4GALT4O60513 344 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 DTNBO60941 627 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 CDKL5O76039 1030 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 DEXIO95424 95 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 RAG1P15918 1043 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 ITGB5P18084 799 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 ITGB8P26012 769 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 GNA11P29992 359 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 SP4Q02446 784 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 MTMR1Q13613 665 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 NEDD9Q14511 834 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 BADQ92934 168 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 GPRASP2Q96D09 838 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 AIFM3Q96NN9 605 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 C22orf23Q9BZE7 217 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 TBX21Q9UL17 535 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
RAB5C-204ENST00000547517 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 CD4P01730 458 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 SREBF1P36956 1147 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 NLRP5P59047 1200 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 ARHGAP4P98171 946 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 ME3Q16798 604 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 METTL7BQ6UX53 244 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 CYFIP1Q7L576 1253 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 NECAB1Q8N987 351 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 PPP1R12CQ9BZL4 782 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 TRMT13Q9NUP7 481 aaKnown RBP13.51□□□□□ -0.25
RAB5C-204ENST00000547517 MYH7BA7E2Y1 1941 aa13.51□□□□□ -0.25
RAB5C-204ENST00000547517 STK36Q9NRP7 1315 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 F2P00734 622 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-204ENST00000547517 KCNA2P16389 499 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 BMP8BP34820 402 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 KAT2BQ92831 832 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 SEZ6LQ9BYH1 1024 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 UPF2Q9HAU5 1272 aaKnown RBP13.5□□□□□ -0.25
RAB5C-204ENST00000547517 JADE2Q9NQC1 790 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 TELO2Q9Y4R8 837 aa13.5□□□□□ -0.25
RAB5C-204ENST00000547517 ATP9AO75110 1047 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms