RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
LGR5-204ENST00000547310 MAMDC2Q7Z304 686 aaPredicted RBP6.73□□□□□ -1.33
LGR5-204ENST00000547310 PTPRN2Q92932 1015 aa6.73□□□□□ -1.33
LGR5-204ENST00000547310 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
LGR5-204ENST00000547310 MRPS23Q9Y3D9 190 aaKnown RBP6.73□□□□□ -1.33
LGR5-204ENST00000547310 K7ESM1 405 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 KCNQ2O43526 872 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 FUCA1P04066 466 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 VIPR1P32241 457 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 MAGEA10P43363 369 aaPredicted RBP6.72□□□□□ -1.33
LGR5-204ENST00000547310 SLC6A11P48066 632 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 GPR85P60893 370 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 GABREP78334 506 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 RAB3GAP1Q15042 981 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 ZNF827Q17R98 1081 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 WWC2Q6AWC2 1192 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 LBX2Q6XYB7 198 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
LGR5-204ENST00000547310 NLRP10Q86W26 655 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.72□□□□□ -1.33
LGR5-204ENST00000547310 PHF20Q9BVI0 1012 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 PCDHA2Q9Y5H9 948 aa6.72□□□□□ -1.33
LGR5-204ENST00000547310 C22orf46C9J442 243 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 N4BP3O15049 544 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 PRICKLE3O43900 615 aaPredicted RBP6.71□□□□□ -1.34
LGR5-204ENST00000547310 ZBTB7AO95365 584 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 SDHBP21912 280 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 TACR1P25103 407 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 BCL6P41182 706 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 SLC9A5Q14940 896 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 PLEKHN1Q494U1 663 aaPredicted RBP6.71□□□□□ -1.34
LGR5-204ENST00000547310 TRIM61Q5EBN2 209 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 CEP68Q76N32 757 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 IFNL3Q8IZI9 196 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 LINC01356Q8N9X3 169 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 TSPAN17Q96FV3 270 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 PEX11GQ96HA9 241 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 TMEM169Q96HH4 297 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 MARCH2Q9P0N8 246 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 NUDT5Q9UKK9 219 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 PTCH2Q9Y6C5 1203 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
LGR5-204ENST00000547310 NUDT19A8MXV4 375 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 AQP7O14520 342 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 IRS4O14654 1257 aaPredicted RBP6.7□□□□□ -1.34
LGR5-204ENST00000547310 MSCO60682 206 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 SQSTM1Q13501 440 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 KIZQ2M2Z5 673 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 VMACQ2NL98 169 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 ZC3H14Q6PJT7 736 aaKnown RBP6.7□□□□□ -1.34
LGR5-204ENST00000547310 TRMT2BQ96GJ1 504 aaKnown RBP6.7□□□□□ -1.34
LGR5-204ENST00000547310 SLITRK6Q9H5Y7 841 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
LGR5-204ENST00000547310 ASXL2Q76L83 1435 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 BLACEA4D250 179 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 C1QTNF3-AMACRE9PGA6 284 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 WNT9AO14904 365 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 EFCAB14O75071 495 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 NTRK1P04629 796 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 NAT1P18440 290 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 SRSF3P84103 164 aaKnown RBP6.69□□□□□ -1.34
LGR5-204ENST00000547310 KCNT2Q6UVM3 1135 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 DCP2Q8IU60 420 aaKnown RBP6.69□□□□□ -1.34
LGR5-204ENST00000547310 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 SYNPOQ8N3V7 929 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 GSTCDQ8NEC7 633 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 SH3TC2Q8TF17 1288 aa6.69□□□□□ -1.34
LGR5-204ENST00000547310 RNPC3Q96LT9 517 aaKnown RBP6.69□□□□□ -1.34
LGR5-204ENST00000547310 MRPL4Q9BYD3 311 aaKnown RBP6.69□□□□□ -1.34
LGR5-204ENST00000547310 F8W031 263 aaPredicted RBP6.68□□□□□ -1.34
LGR5-204ENST00000547310 FBLN1P23142 703 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 FPR2P25090 351 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 PRR5P85299 388 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 EMC4Q5J8M3 183 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 EPB41L1Q9H4G0 881 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 CNTD2Q9H8S5 307 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 SIRT5Q9NXA8 310 aa6.68□□□□□ -1.34
LGR5-204ENST00000547310 COA3Q9Y2R0 106 aaPredicted RBP6.68□□□□□ -1.34
LGR5-204ENST00000547310 PLD2O14939 933 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 ADAM17P78536 824 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 CHRNA2Q15822 529 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 CYP4F22Q6NT55 531 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 CNKSR3Q6P9H4 555 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 TMC6Q7Z403 805 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 NCOA5Q9HCD5 579 aaKnown RBP6.67□□□□□ -1.34
LGR5-204ENST00000547310 CLDND1Q9NY35 253 aa6.67□□□□□ -1.34
LGR5-204ENST00000547310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.66□□□□□ -1.34
LGR5-204ENST00000547310 ARVCFO00192 962 aa6.66□□□□□ -1.34
LGR5-204ENST00000547310 SGSM2O43147 1006 aa6.66□□□□□ -1.34
LGR5-204ENST00000547310 FNDC3BQ53EP0 1204 aaKnown RBP6.66□□□□□ -1.34
LGR5-204ENST00000547310 HABP4Q5JVS0 413 aaKnown RBP6.66□□□□□ -1.34
LGR5-204ENST00000547310 LDHDQ86WU2 507 aa6.66□□□□□ -1.34
LGR5-204ENST00000547310 FAM129CQ86XR2 697 aa6.66□□□□□ -1.34
LGR5-204ENST00000547310 TMEFF1Q8IYR6 380 aa6.66□□□□□ -1.34
LGR5-204ENST00000547310 TP53I13Q8NBR0 393 aaPredicted RBP6.66□□□□□ -1.34
LGR5-204ENST00000547310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms