RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
GCN1-202ENST00000547263 CEP290O15078 2479 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 HAS3O00219 553 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 KIAA0355O15063 1070 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 ZEB2O60315 1214 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 MYCLP12524 364 aaPredicted RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 KCNA2P16389 499 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 TLE2Q04725 743 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 FAAP100Q0VG06 881 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 KAT2BQ92831 832 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
GCN1-202ENST00000547263 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 MROH7Q68CQ1 1323 aa12.53□□□□□ -0.4
GCN1-202ENST00000547263 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 F2P00734 622 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 GNA11P29992 359 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 CIITAP33076 1130 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 HSDL1Q3SXM5 330 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
GCN1-202ENST00000547263 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.41
GCN1-202ENST00000547263 SESTD1Q86VW0 696 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 TRIM22Q8IYM9 498 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 AFG1LQ8WV93 481 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
GCN1-202ENST00000547263 TBC1D32Q96NH3 1257 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 MTG1Q9BT17 334 aaPredicted RBP12.52□□□□□ -0.41
GCN1-202ENST00000547263 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
GCN1-202ENST00000547263 MEIS1O00470 390 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 CPLX1O14810 134 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 ATP9AO75110 1047 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 CDKL5O76039 1030 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 GGPS1O95749 300 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 HOXC8P31273 242 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
GCN1-202ENST00000547263 PTPN11Q06124 597 aaPredicted RBP12.51□□□□□ -0.41
GCN1-202ENST00000547263 STK3Q13188 491 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 NEDD9Q14511 834 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 NLRX1Q86UT6 975 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
GCN1-202ENST00000547263 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
GCN1-202ENST00000547263 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 EHMT1Q9H9B1 1298 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 RTEL1Q9NZ71 1219 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
GCN1-202ENST00000547263 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
GCN1-202ENST00000547263 CLTBP09497 229 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 ITGB8P26012 769 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 RABEP1Q15276 862 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 CEP55Q53EZ4 464 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
GCN1-202ENST00000547263 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 DHX37Q8IY37 1157 aaKnown RBP12.5□□□□□ -0.41
GCN1-202ENST00000547263 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 LENG9Q96B70 501 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
GCN1-202ENST00000547263 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 ZMYND8Q9ULU4 1186 aaPredicted RBP12.5□□□□□ -0.41
GCN1-202ENST00000547263 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 NFASCO94856 1347 aa12.5□□□□□ -0.41
GCN1-202ENST00000547263 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 PPFIA3O75145 1194 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 MAGEA10P43363 369 aaPredicted RBP12.49□□□□□ -0.41
GCN1-202ENST00000547263 PSMC6P62333 389 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 MTMR1Q13613 665 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 DGKDQ16760 1214 aa12.49□□□□□ -0.41
GCN1-202ENST00000547263 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms