RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 PSRC1Q6PGN9 363 aaPredicted RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 TMTC3Q6ZXV5 915 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 PPTC7Q8NI37 304 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 KCNB2Q92953 911 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 CXXC1Q9P0U4 656 aaPredicted RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 WDR81Q562E7 1941 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 SIP14410 1827 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 hCG_1642624A0A1W2PR95 340 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 HAS3O00219 553 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 F2P00734 622 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 CCND2P30279 289 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 SEMA3FQ13275 785 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 LAMC2Q13753 1193 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 DGKDQ16760 1214 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 CELF3Q5SZQ8 465 aaKnown RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 KCNV1Q6PIU1 500 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 MAFAQ8NHW3 353 aaPredicted RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 SCLYQ96I15 445 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 INPP4AQ96PE3 977 aaPredicted RBP11.9□□□□□ -0.5
BEST3-208ENST00000547208 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
BEST3-208ENST00000547208 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 GRXCR1A8MXD5 290 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 GGPS1O95749 300 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 ZNF286BP0CG31 522 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 TGFB3P10600 412 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
BEST3-208ENST00000547208 DNAJB2P25686 324 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 ICAM3P32942 547 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 FUT2Q10981 343 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 GDF6Q6KF10 455 aaPredicted RBP11.89□□□□□ -0.51
BEST3-208ENST00000547208 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
BEST3-208ENST00000547208 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
BEST3-208ENST00000547208 MICAL3Q7RTP6 2002 aa11.89□□□□□ -0.51
BEST3-208ENST00000547208 CHD7Q9P2D1 2997 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 SPATA31C2B4DYI2 1134 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 SORBS3O60504 671 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 STAM2O75886 525 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 FGBP02675 491 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 HSPA4P34932 840 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 PBX2P40425 430 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 PSEN2P49810 448 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 HIC1Q14526 733 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 GPNMBQ14956 572 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 PTGISQ16647 500 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 DHX38Q92620 1227 aaKnown RBP11.88□□□□□ -0.51
BEST3-208ENST00000547208 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 C16orf70Q9BSU1 422 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 PBX4Q9BYU1 374 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
BEST3-208ENST00000547208 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 LOXHD1Q8IVV2 1947 aa11.88□□□□□ -0.51
BEST3-208ENST00000547208 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 IQCF3P0C7M6 154 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 CPA1P15085 419 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 RBL2Q08999 1139 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 KRT32Q14532 448 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 MFSD10Q14728 455 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 WWC2Q6AWC2 1192 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 PSTPIP2Q9H939 334 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 SNX14Q9Y5W7 946 aa11.87□□□□□ -0.51
BEST3-208ENST00000547208 TCF20Q9UGU0 1960 aaKnown RBP11.87□□□□□ -0.51
BEST3-208ENST00000547208 ZBTB43O43298 467 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 FIBPO43427 364 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 PFKMP08237 780 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 CDC27P30260 824 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 HOXC8P31273 242 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 RFC2P35250 354 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 UBE2SQ16763 222 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 RTN1Q16799 776 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
BEST3-208ENST00000547208 GNPTABQ3T906 1256 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms