RNA–Protein interactions for RNA: ENST00000546723.5

RACGAP1-205, Transcript of Rac GTPase activating protein 1, human

TSL 2

Gene RACGAP1, Length 574 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-205	ENST00000546723	MTG1	Q9BT17	334 aa	Predicted RBP	11.61	□□□□□ -0.55
RACGAP1-205	ENST00000546723	BACH2	Q9BYV9	841 aa		11.61	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ORC3	Q9UBD5	711 aa	Predicted RBP	11.61	□□□□□ -0.55
RACGAP1-205	ENST00000546723	UBIAD1	Q9Y5Z9	338 aa		11.61	□□□□□ -0.55
RACGAP1-205	ENST00000546723	STK36	Q9NRP7	1315 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PLXNA1	Q9UIW2	1896 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ARVCF	O00192	962 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	TLR3	O15455	904 aa	Known RBP	11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PPFIA4	O75335	1185 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PURA	Q00577	322 aa	Known RBP	11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	TLE2	Q04725	743 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ARHGAP1	Q07960	439 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ITGA7	Q13683	1181 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SNX17	Q15036	470 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	TRIM60	Q495X7	471 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	MYSM1	Q5VVJ2	828 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	BLID	Q8IZY5	108 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	EMID1	Q96A84	441 aa	Predicted RBP	11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PGBD1	Q96JS3	809 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SPATA33	Q96N06	139 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	TOX2	Q96NM4	488 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SENP7	Q9BQF6	1050 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	MXRA8	Q9BRK3	442 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ALG1	Q9BT22	464 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	JADE2	Q9NQC1	790 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PCDHA4	Q9UN74	947 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	MROH7	Q68CQ1	1323 aa		11.6	□□□□□ -0.55
RACGAP1-205	ENST00000546723	NOP56	O00567	594 aa	Known RBP	11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	LARGE1	O95461	756 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	CTDNEP1	O95476	244 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	MMP3	P08254	477 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ITGB5	P18084	799 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SREBF1	P36956	1147 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	CDK7	P50613	346 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ARHGAP4	P98171	946 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SP2	Q02086	613 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	MTMR1	Q13613	665 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	CYFIP1	Q7L576	1253 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	PPTC7	Q8NI37	304 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	TBC1D32	Q96NH3	1257 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	LLPH	Q9BRT6	129 aa	Known RBP	11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SMCHD1	A6NHR9	2005 aa		11.59	□□□□□ -0.55
RACGAP1-205	ENST00000546723	SORBS3	O60504	671 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PQBP1	O60828	265 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CYP3A4	P08684	503 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SYN1	P17600	705 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	UBA1	P22314	1058 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	MCM2	P49736	904 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CHMP4BP1	P59074	171 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PSMC6	P62333	389 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	TRIM29	Q14134	588 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CEP55	Q53EZ4	464 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	METTL7B	Q6UX53	244 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	ANKRD33	Q7Z3H0	272 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PLA2G4D	Q86XP0	818 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CCDC83	Q8IWF9	413 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SLC43A3	Q8NBI5	491 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	DAGLB	Q8NCG7	672 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	NSUN7	Q8NE18	718 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	AIFM3	Q96NN9	605 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	KATNAL1	Q9BW62	490 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	BRMS1	Q9HCU9	246 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	TMEM39A	Q9NV64	488 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	KCNJ14	Q9UNX9	436 aa		11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-205	ENST00000546723	MEIS1	O00470	390 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CLTB	P09497	229 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SUPT20HL2	P0C7V6	817 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	FDPS	P14324	419 aa	Known RBP	11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	USP11	P51784	963 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PTPN11	Q06124	597 aa	Predicted RBP	11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SEMA3F	Q13275	785 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	NBPF20	Q3BBV1	942 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	HSDL1	Q3SXM5	330 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	FAM47C	Q5HY64	1035 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	NIPA1	Q7RTP0	329 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	KRT25	Q7Z3Z0	450 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	RASGRP4	Q8TDF6	673 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SEPT1	Q8WYJ6	367 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SDF4	Q9BRK5	362 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	PHF20	Q9BVI0	1012 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	KCNH7	Q9NS40	1196 aa		11.57	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CCDC194	A0A1B0GVG4	234 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	DTNB	O60941	627 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	ATP9A	O75110	1047 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	AR	P10275	920 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	RAG1	P15918	1043 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	HMGN5	P82970	282 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	SP4	Q02446	784 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	FAAP100	Q0VG06	881 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	NONO	Q15233	471 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	NFRKB	Q6P4R8	1299 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	FAM184A	Q8NB25	1140 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	CYP2W1	Q8TAV3	490 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	TBCK	Q8TEA7	893 aa		11.56	□□□□□ -0.56
RACGAP1-205	ENST00000546723	BCAS3	Q9H6U6	928 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms